RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 TDRD1Q9BXT4 1180 aaKnown RBP20.78■□□□□ 0.92
HMGXB4-203ENST00000420166 EBF2Q9HAK2 575 aa20.78■□□□□ 0.92
HMGXB4-203ENST00000420166 USP29Q9HBJ7 922 aa20.78■□□□□ 0.92
HMGXB4-203ENST00000420166 SEMA4GQ9NTN9 838 aa20.78■□□□□ 0.92
HMGXB4-203ENST00000420166 SLCO1B1Q9Y6L6 691 aa20.78■□□□□ 0.92
HMGXB4-203ENST00000420166 A0A1B0GTW7 788 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 RIOK3O14730 519 aaKnown RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 BCAT2O15382 392 aaPredicted RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 KCNN4O15554 427 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 FZD6O60353 706 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 STK10O94804 968 aaKnown RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 FGGP02679 453 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 ZNF806P0C7X5 589 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 NFKB1P19838 968 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 MMP12P39900 470 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 SIX1Q15475 284 aaPredicted RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 SLC14A2Q15849 920 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 CSRP2Q16527 193 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 DUOXA1Q1HG43 343 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 TMEM52BQ4KMG9 183 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 SETMARQ53H47 684 aaPredicted RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 PID1Q7Z2X4 250 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 ALYREFQ86V81 257 aaKnown RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 CEP76Q8TAP6 659 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 KLK6Q92876 244 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 TADA1Q96BN2 335 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 PBKQ96KB5 322 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 RBM15Q96T37 977 aaKnown RBP eCLIP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 FRMD8P1Q9BZ68 369 aaPredicted RBP20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 DNPEPQ9ULA0 475 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 PHTF1Q9UMS5 762 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 DMTF1Q9Y222 760 aa20.77■□□□□ 0.92
HMGXB4-203ENST00000420166 PATE3B3GLJ2 98 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 LIASO43766 372 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 PRLP01236 227 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 PDHA1P08559 390 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 PRLRP16471 622 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 GNG11P61952 73 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 FAM193AP78312 1265 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 TRIM61Q5EBN2 209 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 SPATA22Q8NHS9 363 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 CXorf40AQ8TE69 158 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 PIH1D2Q8WWB5 315 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 MAIP1Q8WWC4 291 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 C1QTNF2Q9BXJ5 285 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 TM9SF3Q9HD45 589 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 CHKBQ9Y259 395 aa20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 TP53BP1Q12888 1972 aaPredicted RBP20.76■□□□□ 0.91
HMGXB4-203ENST00000420166 ADAMTS9Q9P2N4 1935 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 CFAP69A5D8W1 941 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 IGLON5A6NGN9 336 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 PRR5-ARHGAP8B1AHC4 643 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 CFIP05156 583 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 RPL26P61254 145 aaKnown RBP20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 RALGDSQ12967 914 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 FGL2Q14314 439 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SF3A2Q15428 464 aaKnown RBP20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 LONRF2Q1L5Z9 754 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 TCEAL6Q6IPX3 200 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 NAPEPLDQ6IQ20 393 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SLC23A3Q6PIS1 610 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 DPPA4Q7L190 304 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 C17orf53Q8N3J3 647 aaPredicted RBP20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 GPR161Q8N6U8 529 aaKnown RBP20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 C1orf54Q8WWF1 131 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 TCEAL3Q969E4 200 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SERAC1Q96JX3 654 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SLC6A18Q96N87 628 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SPATA13Q96N96 652 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 FCRL5Q96RD9 977 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 WDR24Q96S15 920 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 WRAP53Q9BUR4 548 aaKnown RBP20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SLC17A9Q9BYT1 436 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 GBA3Q9H227 469 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 PCDH9Q9HC56 1237 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 B4GALT6Q9UBX8 382 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 RSPH14Q9UHP6 348 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 SNX12Q9UMY4 172 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 RPL26L1Q9UNX3 145 aaKnown RBP20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 PPIL1Q9Y3C6 166 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 PCDH15Q96QU1 1955 aa20.75■□□□□ 0.91
HMGXB4-203ENST00000420166 KHNYNO15037 678 aaKnown RBP20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 SLC31A1O15431 190 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 MMP20O60882 483 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 OPHN1O60890 802 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 MT-CYBP00156 380 aaPredicted RBP20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 NFKBIAP25963 317 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 EPHB1P54762 984 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 RACK1P63244 317 aaKnown RBP20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 SEMG2Q02383 582 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 OASLQ15646 514 aaKnown RBP20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 ANKRD20A2Q5SQ80 823 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 ANKRD20A1Q5TYW2 823 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 ANKRD20A3Q5VUR7 823 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 ITPRIPL1Q6GPH6 555 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 PRR23CQ6ZRP0 262 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 USP45Q70EL2 814 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 RASGEF1CQ8N431 466 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 FAM71DQ8N9W8 422 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 LPCAT1Q8NF37 534 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms