RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CRYMQ14894 314 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 HSF5Q4G112 596 aaPredicted RBP14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 ANKRD20A4Q4UJ75 823 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TNFAIP8L3Q5GJ75 292 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 CERCAMQ5T4B2 595 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 DPY19L3Q6ZPD9 716 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 UBALD2Q8IYN6 164 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 MPP5Q8N3R9 675 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TMIEQ8NEW7 156 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 PGM2Q96G03 612 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 EXOC2Q96KP1 924 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 CYTH2Q99418 400 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 P2RY13Q9BPV8 354 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 HEPHQ9BQS7 1158 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 DHRS4Q9BTZ2 278 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 SUV39H2Q9H5I1 410 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TREX1Q9NSU2 369 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 EURLQ9NYK6 297 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 SUN2Q9UH99 717 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 RAPGEFL1Q9UHV5 662 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 PHTF1Q9UMS5 762 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 CHMP2BQ9UQN3 213 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 PCDHGC4Q9Y5F7 938 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 MYO18AQ92614 2054 aaKnown RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 FAM159BA6NKW6 160 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 F5H423 210 aaPredicted RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 LDB2O43679 373 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 OPA1O60313 960 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 SIN3BO75182 1162 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 BANF1O75531 89 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 GJB3O75712 270 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 FAM155BO75949 473 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 SSTR1P30872 391 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 KIR2DL1P43626 348 aaPredicted RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 SUOXP51687 545 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 POLR2LP62875 67 aaKnown RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZNF844Q08AG5 666 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 GPS2Q13227 327 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 OLIG2Q13516 323 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 ELAVL3Q14576 367 aaKnown RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZNF234Q14588 700 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 PCSK7Q16549 785 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 TMEM196Q5HYL7 178 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 ATXN7L2Q5T6C5 722 aaPredicted RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 NDUFAF2Q8N183 169 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 PPHLN1Q8NEY8 458 aaKnown RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 MCCC1Q96RQ3 725 aaPredicted RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 TM6SF2Q9BZW4 377 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 VPS18Q9P253 973 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 EVLQ9UI08 416 aaPredicted RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZNF180Q9UJW8 692 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 HCN2Q9UL51 889 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 SORCS3Q9UPU3 1222 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 MAD1L1Q9Y6D9 718 aa14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
SHMT1P1-201ENST00000419974 MUC22E2RYF6 1773 aaPredicted RBP14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 MYO10Q9HD67 2058 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 TTC24A2A3L6 582 aaPredicted RBP14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 TMEM221A6NGB7 291 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 K7EQS6 105 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 M0R296 226 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CDH16O75309 829 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CRTAMO95727 393 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 PDHA1P08559 390 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 NFKBIAP25963 317 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 PLA2G5P39877 138 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CHRNA4P43681 627 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 TAF1AQ15573 450 aaPredicted RBP14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 QPCTQ16769 361 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 ACCSLQ4AC99 568 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 FBXO43Q4G163 708 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 KIAA0930Q6ICG6 404 aaPredicted RBP14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 GDPD4Q6W3E5 623 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 Q6ZVU0 165 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 GALNT7Q86SF2 657 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CAMK1DQ8IU85 385 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CNTN4Q8IWV2 1026 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 LMNTD2Q8IXW0 634 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 STYXQ8WUJ0 223 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CYB5D2Q8WUJ1 264 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 SORCS1Q8WY21 1168 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 SCRN2Q96FV2 425 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 APOL2Q9BQE5 337 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 TNKS2Q9H2K2 1166 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 VPS37BQ9H9H4 285 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 FBRSQ9HAH7 460 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 CHRAC1Q9NRG0 131 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 IL36AQ9UHA7 158 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 LGALS13Q9UHV8 139 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 PPM1HQ9ULR3 514 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 RPS6KL1Q9Y6S9 549 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 WASF2Q9Y6W5 498 aa14.34□□□□□ -0.11
SHMT1P1-201ENST00000419974 BPTFQ12830 3046 aa14.33□□□□□ -0.11
SHMT1P1-201ENST00000419974 MYOFQ9NZM1 2061 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 A0A0J9YYE9 177 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 TTC34A8MYJ7 566 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms