RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CCNB1P14635 433 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 SERPINA4P29622 427 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 GRIA4P48058 902 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 RACK1P63244 317 aaKnown RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 IFI35P80217 286 aaPredicted RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 BCL2L1Q07817 233 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 UGP2Q16851 508 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 ZNF284Q2VY69 593 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 AASDHQ4L235 1098 aaPredicted RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 KIAA1161Q6NSJ0 714 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 BRAT1Q6PJG6 821 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 BBS12Q6ZW61 710 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 BZW1Q7L1Q6 419 aaKnown RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 TTC7BQ86TV6 843 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 PRPF39Q86UA1 669 aaKnown RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 ZSCAN30Q86W11 494 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 HORMAD1Q86X24 394 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 ZSWIM9Q86XI8 627 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 NETO1Q8TDF5 533 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 SNX19Q92543 992 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 HES6Q96HZ4 224 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 LGMNQ99538 433 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 IL12RB2Q99665 862 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 HERPUD2Q9BSE4 406 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 NOD2Q9HC29 1040 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 NT5MQ9NPB1 228 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 ZFR2Q9UPR6 939 aaKnown RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 DMTF1Q9Y222 760 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 ATP8A1Q9Y2Q0 1164 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 TMEM131Q92545 1883 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 A0A1W2PR77 199 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 CDX4O14627 284 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 WNT9AO14904 365 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 PPP1R12AO14974 1030 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 DDX3YO15523 660 aaKnown RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 HTRA2O43464 458 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 NRDCO43847 1150 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 SOCS5O75159 536 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 PCDH8O95206 1070 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 FTCDO95954 541 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 PYGMP11217 842 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 PECAM1P16284 738 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 ENGP17813 658 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 CES1P23141 567 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 MAT2AP31153 395 aaKnown RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 AFF3P51826 1226 aaKnown RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 MAXP61244 160 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 DYNLT1P63172 113 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 BNC1Q01954 994 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 IHHQ14623 411 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 PRKD1Q15139 912 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 LLGL1Q15334 1064 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 TMEM52BQ4KMG9 183 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 SETMARQ53H47 684 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 KAZNQ674X7 775 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 SEL1L3Q68CR1 1132 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 NAPEPLDQ6IQ20 393 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 CCDC50Q8IVM0 306 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 CNTD1Q8N815 330 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 ARRDC2Q8TBH0 407 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 ASB12Q8WXK4 309 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 FEM1CQ96JP0 617 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 SLC6A18Q96N87 628 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 EDEM2Q9BV94 578 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 C1QTNF2Q9BXJ5 285 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 OSBPL8Q9BZF1 889 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 ZDHHC5Q9C0B5 715 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 POLR1EQ9GZS1 481 aaKnown RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 FSCN3Q9NQT6 498 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 RBM22Q9NW64 420 aaKnown RBP eCLIP10.6□□□□□ -0.71
RFC1-203ENST00000418436 SAE1Q9UBE0 346 aaPredicted RBP10.6□□□□□ -0.71
RFC1-203ENST00000418436 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 GUCA1BQ9UMX6 200 aa10.6□□□□□ -0.71
RFC1-203ENST00000418436 A0A1W2PQ67 120 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 UPK3BL1B0FP48 263 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 UPK3BL2E5RIL1 263 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 PRAMEF26H0Y7S4 382 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 APOC4-APOC2K7ER74 178 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 KCNK1O00180 336 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 SLC30A4O14863 429 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 TM4SF5O14894 197 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 VILLO15195 856 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 FZD6O60353 706 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 JCHAINP01591 159 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 APOC2P02655 101 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 WNT1P04628 370 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 HLA-DQB2P05538 268 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 SYPP08247 313 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 ITIH2P19823 946 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 SDHBP21912 280 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 CD38P28907 300 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 CSNK1EP49674 416 aaKnown RBP10.59□□□□□ -0.71
RFC1-203ENST00000418436 POLR2LP62875 67 aaKnown RBP10.59□□□□□ -0.71
RFC1-203ENST00000418436 ELP6Q0PNE2 266 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 AP1B1Q10567 949 aa10.59□□□□□ -0.71
RFC1-203ENST00000418436 TRAF2Q12933 501 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms