RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 DGKZQ13574 1117 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 PITRM1Q5JRX3 1037 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 CLEC6AQ6EIG7 209 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 C16orf62Q7Z3J2 963 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 SLC34A3Q8N130 599 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 PIH1D2Q8WWB5 315 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 OR52E6Q96RD3 313 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 WDR12Q9GZL7 423 aaKnown RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■□□□□ 8.6
UBR4-205ENST00000417040 ZNF224Q9NZL3 707 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 HAT1O14929 419 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 CHRNGP07510 517 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 FGRP09769 529 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 OLFML2AQ68BL7 652 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 PHF10Q8WUB8 498 aaKnown RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 NDRG1Q92597 394 aaKnown RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 TMEM216Q9P0N5 145 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 ADAM28Q9UKQ2 775 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 SSR3Q9UNL2 185 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 FUT4P22083 530 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 VPS26BQ4G0F5 336 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 METTL7BQ6UX53 244 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 VANGL1Q8TAA9 524 aaPredicted RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 GRIN3AQ8TCU5 1115 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 GJD4Q96KN9 370 aaPredicted RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 TBATAQ96M53 351 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 MAT2BQ9NZL9 334 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 RPS6KA6Q9UK32 745 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 PPIEQ9UNP9 301 aaKnown RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 POLR1DQ9Y2S0 133 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 AREL1O15033 823 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 AP2A2O94973 939 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 IFNGR2P38484 337 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 BCL2L1Q07817 233 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 MTAPQ13126 283 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 WSCD1Q658N2 575 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 GPRIN3Q6ZVF9 776 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 TCAIMQ8N3R3 496 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 OR5B17Q8NGF7 314 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 POLE3Q9NRF9 147 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 COMMD9Q9P000 198 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 ALOX15BO15296 676 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 TM7SF2O76062 418 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 EGFRP00533 1210 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 FCHO2Q0JRZ9 810 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 BNIP2Q12982 314 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 DPYSQ14117 519 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 FAM171A1Q5VUB5 890 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 CADM1Q9BY67 442 aaKnown RBP12.1□□□□□ -0.47
UBR4-205ENST00000417040 ING3Q9NXR8 418 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 ENOPH1Q9UHY7 261 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 PSMD13Q9UNM6 376 aa12.1□□□□□ -0.47
UBR4-205ENST00000417040 SF3B1O75533 1304 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■■■■■ 43.5
UBR4-205ENST00000417040 DGKAP23743 735 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PBX1P40424 430 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 ABRQ12979 859 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 SDHAF4Q5VUM1 108 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 GFM1Q96RP9 751 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 TBC1D30Q9Y2I9 924 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 GMFGO60234 142 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 SHOX2O60902 331 aaPredicted RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 AZGP1P25311 298 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 SLC5A3P53794 718 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 MXD1Q05195 221 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 BLMHQ13867 455 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 LPGAT1Q92604 370 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 TNKS2Q9H2K2 1166 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 ASB8Q9H765 288 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 H3BRB1 525 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 FSCN2O14926 492 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PLD1Q13393 1074 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 C5orf22Q49AR2 442 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 IPCEF1Q8WWN9 437 aaPredicted RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 CPA4Q9UI42 421 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 SNX6Q9UNH7 406 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 AZIN1O14977 448 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 OR5F1O95221 314 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 F7P08709 466 aaPredicted RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 IFI30P13284 250 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 RCVRNP35243 200 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 TAF13Q15543 124 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms