RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 TPGS2Q68CL5 300 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 TDRD5Q8NAT2 981 aaKnown RBP15.46■□□□□ 0.06
LRCH3-202ENST00000414675 OR13C4Q8NGS5 318 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 SGF29Q96ES7 293 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 ZFRQ96KR1 1074 aaKnown RBP15.46■□□□□ 0.06
LRCH3-202ENST00000414675 PSKH2Q96QS6 385 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 CYP2S1Q96SQ9 504 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 HERC2P3Q9BVR0 1158 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 DRC3Q9H069 523 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 MAN1C1Q9NR34 630 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 TMEM39AQ9NV64 488 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 WBP1LQ9NX94 342 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.46■□□□□ 0.06
LRCH3-202ENST00000414675 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.46■□□□□ 0.06
LRCH3-202ENST00000414675 NKX1-2Q9UD57 310 aaPredicted RBP15.46■□□□□ 0.06
LRCH3-202ENST00000414675 C15orf41Q9Y2V0 281 aa15.46■□□□□ 0.06
LRCH3-202ENST00000414675 ENTPD5O75356 428 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 H2AFYO75367 372 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CLDN11O75508 207 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 RHOCP08134 193 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SERPINF2P08697 491 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 DNAJB1P25685 340 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CLCN5P51795 746 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 PRAMEP78395 509 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 ACVR1Q04771 509 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CSHL1Q14406 222 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SEMA3AQ14563 771 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 TAF12Q16514 161 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 ARL13AQ5H913 290 aaPredicted RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 ADGRF1Q5T601 910 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CXorf57Q6NSI4 855 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 EPGNQ6UW88 154 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 DNAJB7Q7Z6W7 309 aaPredicted RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 LSMEM2Q8N112 164 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 TXNDC5Q8NBS9 432 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 RBM15BQ8NDT2 890 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 N4BP2L2Q92802 583 aaPredicted RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 TRMT2BQ96GJ1 504 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 RSRC1Q96IZ7 334 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CINPQ9BW66 212 aaPredicted RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SHCBP1LQ9BZQ2 653 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CRISPLD2Q9H0B8 497 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 ZNF334Q9HCZ1 680 aaPredicted RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 HSFX1Q9UBD0 423 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SEPT3Q9UH03 358 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 A0A087X1B8 175 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 NEMP2A6NFY4 417 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 PIGNO95427 931 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 EPOP01588 193 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 AOC1P19801 751 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SLC12A2P55011 1212 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CDKN2DP55273 166 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 RAB33AQ14088 237 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 CYTH1Q15438 398 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 HECTD2Q5U5R9 776 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 ANKRD49Q8WVL7 239 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SREK1Q8WXA9 508 aaKnown RBP15.45■□□□□ 0.06
LRCH3-202ENST00000414675 SPO11Q9Y5K1 396 aa15.45■□□□□ 0.06
LRCH3-202ENST00000414675 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.44■□□□□ 0.06
LRCH3-202ENST00000414675 A0A1B0GVM2 712 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 ILVBLA1L0T0 632 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 CCDC162PA2VCL2 907 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 TCAF2A6NFQ2 919 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 PRRG1O14668 218 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 NDST3O95803 873 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 GOT2P00505 430 aaKnown RBP15.44■□□□□ 0.06
LRCH3-202ENST00000414675 PRSS56P0CW18 603 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 CR2P20023 1033 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 SCNN1BP51168 640 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 ZXDBP98169 803 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 ZNF177Q13360 481 aaPredicted RBP15.44■□□□□ 0.06
LRCH3-202ENST00000414675 TMEM207Q6UWW9 146 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 TMC7Q7Z402 723 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 OR52B2Q96RD2 323 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 MYCBPQ99417 103 aaPredicted RBP15.44■□□□□ 0.06
LRCH3-202ENST00000414675 MRPL46Q9H2W6 279 aaKnown RBP15.44■□□□□ 0.06
LRCH3-202ENST00000414675 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.44■□□□□ 0.06
LRCH3-202ENST00000414675 KIAA1671Q9BY89 1806 aa15.44■□□□□ 0.06
LRCH3-202ENST00000414675 CBX4O00257 560 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 SPATA31D3P0C874 917 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 KCNA5P22460 613 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 ELF1P32519 619 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 BTG3Q14201 252 aaPredicted RBP15.43■□□□□ 0.06
LRCH3-202ENST00000414675 TSNAXIP1Q2TAA8 658 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 FSCBQ5H9T9 825 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 TECRLQ5HYJ1 363 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 WASHC2DQ5SRD0 308 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 RNF219Q5W0B1 726 aaPredicted RBP15.43■□□□□ 0.06
LRCH3-202ENST00000414675 SPATA31D4Q6ZUB0 917 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 CHST9Q7L1S5 443 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 GALNT7Q86SF2 657 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 PIM3Q86V86 326 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 POU5F2Q8N7G0 328 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 BRSK1Q8TDC3 778 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 ADAMTS19Q8TE59 1207 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 MRPL57Q9BQC6 102 aaKnown RBP15.43■□□□□ 0.06
LRCH3-202ENST00000414675 ILKAPQ9H0C8 392 aaPredicted RBP15.43■□□□□ 0.06
LRCH3-202ENST00000414675 ZDHHC2Q9UIJ5 367 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 PLA2G4CQ9UP65 541 aa15.43■□□□□ 0.06
LRCH3-202ENST00000414675 TBC1D30Q9Y2I9 924 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms