RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PRR5-ARHGAP8B1AHC4 643 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 OPHN1O60890 802 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ZNF806P0C7X5 589 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 MMP12P39900 470 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 OASLQ15646 514 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 CSRP2Q16527 193 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 DUOXA1Q1HG43 343 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 SETMARQ53H47 684 aaPredicted RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ANKRD20A2Q5SQ80 823 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ANKRD20A1Q5TYW2 823 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ANKRD20A3Q5VUR7 823 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 PAPD7Q5XG87 772 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ADAT2Q7Z6V5 191 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ACTRT1Q8TDG2 376 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 CXorf40AQ8TE69 158 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 PDCD6IPQ8WUM4 868 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 SNX19Q92543 992 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 SCRN2Q96FV2 425 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 SPATA13Q96N96 652 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 PPP1R2P1Q96PQ5 205 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 MCCC1Q96RQ3 725 aaPredicted RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 WDR24Q96S15 920 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 C1QTNF2Q9BXJ5 285 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 PCDH9Q9HC56 1237 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 TMEM74BQ9NUR3 256 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 ZFR2Q9UPR6 939 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 TNRC6BQ9UPQ9 1833 aaKnown RBP16.58■□□□□ 0.24
LINC00398-201ENST00000414407 CEP192Q8TEP8 1941 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 GPR179Q6PRD1 2367 aa16.58■□□□□ 0.24
LINC00398-201ENST00000414407 DMDP11532 3685 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 A0A1B0GTW7 788 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 BCAT2O15382 392 aaPredicted RBP16.57■□□□□ 0.24
LINC00398-201ENST00000414407 GCATO75600 419 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 PRLP01236 227 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 ITGAVP06756 1048 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 PDHA1P08559 390 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 NFKB1P19838 968 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 MAOBP27338 520 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 RACK1P63244 317 aaKnown RBP16.57■□□□□ 0.24
LINC00398-201ENST00000414407 USP45Q70EL2 814 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 DPPA4Q7L190 304 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00398-201ENST00000414407 C1orf54Q8WWF1 131 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 LENG8Q96PV6 779 aaPredicted RBP16.57■□□□□ 0.24
LINC00398-201ENST00000414407 NAPGQ99747 312 aaPredicted RBP16.57■□□□□ 0.24
LINC00398-201ENST00000414407 TMEM121Q9BTD3 319 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 ADGRE3Q9BY15 652 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 SLC17A9Q9BYT1 436 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 GBA3Q9H227 469 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 EBF2Q9HAK2 575 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 FAM153AQ9UHL3 310 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 RSPH14Q9UHP6 348 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 CHKBQ9Y259 395 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 ITM2BQ9Y287 266 aa16.57■□□□□ 0.24
LINC00398-201ENST00000414407 OTOGLQ3ZCN5 2332 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 CTAGE9A4FU28 777 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 PRAMEF26H0Y7S4 382 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
LINC00398-201ENST00000414407 ANXA9O76027 345 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 EPOP01588 193 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 CYP2A6P11509 494 aaPredicted RBP16.56■□□□□ 0.24
LINC00398-201ENST00000414407 ITIH2P19823 946 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 TGM1P22735 817 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 AFF3P51826 1226 aaKnown RBP16.56■□□□□ 0.24
LINC00398-201ENST00000414407 EPHB1P54762 984 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 FAM193AP78312 1265 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 CDK18Q07002 472 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SPEM2Q0P670 501 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SGCGQ13326 291 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 MPP3Q13368 585 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 AGERQ15109 404 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 P3H1Q32P28 736 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 LRRC73Q5JTD7 316 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SEL1L3Q68CR1 1132 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 NAPEPLDQ6IQ20 393 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SLC23A3Q6PIS1 610 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 FAM71DQ8N9W8 422 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SPATA22Q8NHS9 363 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 FAM174AQ8TBP5 190 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 COG1Q8WTW3 980 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 TRIM44Q96DX7 344 aaPredicted RBP16.56■□□□□ 0.24
LINC00398-201ENST00000414407 TRIB3Q96RU7 358 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 HINFPQ9BQA5 517 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 MIR1-1HGQ9H1L0 117 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SEMA4GQ9NTN9 838 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 GGT7Q9UJ14 662 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 SLC6A14Q9UN76 642 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 ZNF148Q9UQR1 794 aa16.56■□□□□ 0.24
LINC00398-201ENST00000414407 ANKRD36A6QL64 1941 aa16.55■□□□□ 0.24
LINC00398-201ENST00000414407 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
LINC00398-201ENST00000414407 A0A0J9YYE9 177 aa16.55■□□□□ 0.24
LINC00398-201ENST00000414407 IGLON5A6NGN9 336 aa16.55■□□□□ 0.24
LINC00398-201ENST00000414407 ANKRD66B4E2M5 251 aa16.55■□□□□ 0.24
LINC00398-201ENST00000414407 KHNYNO15037 678 aaKnown RBP16.55■□□□□ 0.24
LINC00398-201ENST00000414407 MT-CYBP00156 380 aaPredicted RBP16.55■□□□□ 0.24
LINC00398-201ENST00000414407 TRBC1P01850 177 aa16.55■□□□□ 0.24
LINC00398-201ENST00000414407 HNRNPA2B1P22626 353 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms