RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 COG4Q9H9E3 785 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 RPL26L1Q9UNX3 145 aaKnown RBP24.68■■□□□ 1.54
VRK2-202ENST00000412104 NDST3O95803 873 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 S1PR4O95977 384 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 CLTBP09497 229 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 MYL4P12829 197 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 PPP3CCP48454 512 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 KDSRQ06136 332 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 RFTN1Q14699 578 aaPredicted RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 E2F5Q15329 346 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 CFAP157Q5JU67 520 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 HECTD2Q5U5R9 776 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 C16orf59Q7L2K0 433 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 DNAJB7Q7Z6W7 309 aaPredicted RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 TMEM150AQ86TG1 271 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 BRSK1Q8TDC3 778 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 TBATAQ96M53 351 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 NSMCE3Q96MG7 304 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 MRPL57Q9BQC6 102 aaKnown RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 ILKAPQ9H0C8 392 aaPredicted RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 SUDS3Q9H7L9 328 aaPredicted RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 SMPD4Q9NXE4 827 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 TBC1D30Q9Y2I9 924 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 L3MBTL1Q9Y468 752 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 B2RBV5 119 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 BUD23O43709 281 aaKnown RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 PIRTP0C851 137 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 LAG3P18627 525 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 MPSTP25325 297 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 NAGLUP54802 743 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 CSHL1Q14406 222 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 PTPRCAPQ14761 206 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 WASHC2DQ5SRD0 308 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 ICE2Q659A1 982 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 EPGNQ6UW88 154 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 TTC8Q8TAM2 541 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 AGR3Q8TD06 166 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 MCUR1Q96AQ8 359 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 TSPAN17Q96FV3 270 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 EXOC2Q96KP1 924 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 DENND2DQ9H6A0 471 aaPredicted RBP24.67■■□□□ 1.54
VRK2-202ENST00000412104 SPG21Q9NZD8 308 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 RAP2CQ9Y3L5 183 aa24.67■■□□□ 1.54
VRK2-202ENST00000412104 SPECC1L-ADORA2AF8WAN1 911 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 CBX4O00257 560 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 OBSL1O75147 1896 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 MBL2P11226 248 aaPredicted RBP24.66■■□□□ 1.54
VRK2-202ENST00000412104 GM2AP17900 193 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 CR2P20023 1033 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 ELF1P32519 619 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 CCR10P46092 362 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 CXorf57Q6NSI4 855 aaKnown RBP24.66■■□□□ 1.54
VRK2-202ENST00000412104 DDX53Q86TM3 631 aaKnown RBP24.66■■□□□ 1.54
VRK2-202ENST00000412104 ZFRQ96KR1 1074 aaKnown RBP24.66■■□□□ 1.54
VRK2-202ENST00000412104 INSL5Q9Y5Q6 135 aa24.66■■□□□ 1.54
VRK2-202ENST00000412104 RPP40O75818 363 aaKnown RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 GOT2P00505 430 aaKnown RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 SCNN1BP51168 640 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 ARL13AQ5H913 290 aaPredicted RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 RNF219Q5W0B1 726 aaPredicted RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 TMC7Q7Z402 723 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 SPNS2Q8IVW8 549 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 TCEAL8Q8IYN2 117 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 OR13C4Q8NGS5 318 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 FBXO27Q8NI29 283 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 DDX50Q9BQ39 737 aaKnown RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 MUC3BQ9H195 1237 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 GPAMQ9HCL2 828 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 INSIG1O15503 277 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 PEX11AO75192 247 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 PIGNO95427 931 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 EPHB3P54753 998 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 CYTH1Q15438 398 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 FAM83EQ2M2I3 478 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 SLC9B1Q4ZJI4 515 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 TMPRSS6Q8IU80 811 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 HERC6Q8IVU3 1022 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 CMTR2Q8IYT2 770 aaKnown RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 RBM15BQ8NDT2 890 aaKnown RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 MAPK15Q8TD08 544 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 MMADHCQ9H3L0 296 aaPredicted RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 TRPC7Q9HCX4 862 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 ZNF334Q9HCZ1 680 aaPredicted RBP24.65■■□□□ 1.54
VRK2-202ENST00000412104 STOML2Q9UJZ1 356 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 RIMKLBQ9ULI2 386 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 VWA7Q9Y334 891 aa24.65■■□□□ 1.54
VRK2-202ENST00000412104 KIAA1671Q9BY89 1806 aa24.64■■□□□ 1.54
VRK2-202ENST00000412104 CCDC162PA2VCL2 907 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 GLP2RO95838 553 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 LTA4HP09960 611 aaKnown RBP24.64■■□□□ 1.53
VRK2-202ENST00000412104 ASPHQ12797 758 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 TECRLQ5HYJ1 363 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 RNF135Q8IUD6 432 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 TXNDC5Q8NBS9 432 aaKnown RBP24.64■■□□□ 1.53
VRK2-202ENST00000412104 SGF29Q96ES7 293 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 NUDCD1Q96RS6 583 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 SLC22A12Q96S37 553 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 SCUBE2Q9NQ36 999 aa24.64■■□□□ 1.53
VRK2-202ENST00000412104 CCDC166P0CW27 439 aa24.63■■□□□ 1.53
VRK2-202ENST00000412104 RPL14P50914 215 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms