RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TMEM132CQ8N3T6 1108 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 PRCCQ92733 491 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 FAM237BA0A1B0GVD1 139 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 PIPSLA2A3N6 862 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 TPP1O14773 563 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 CCND3P30281 292 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 S100A3P33764 101 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 BHLHB9Q6PI77 547 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 AGAP11Q8TF27 550 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 SCLYQ96I15 445 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 HIC2Q96JB3 615 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 INTS7Q9NVH2 962 aaKnown RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 RPS6KB2Q9UBS0 482 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 LRRC72A6NJI9 287 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 SLC28A1O00337 649 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 MSI1O43347 362 aaKnown RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 SLC25A14O95258 325 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 ITGA2BP08514 1039 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 HOXB6P17509 224 aaKnown RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 RAD23AP54725 363 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 FBXO46Q6PJ61 603 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 PIWIL2Q8TC59 973 aaKnown RBP16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 HDAC10Q969S8 669 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 BBS4Q96RK4 519 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 HEPHQ9BQS7 1158 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 AASDHPPTQ9NRN7 309 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 BAIAP3O94812 1187 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 ATP6V1B1P15313 513 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 AADATQ8N5Z0 425 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 GPR152Q8TDT2 470 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 GLMNQ92990 594 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 RNPEPL1Q9HAU8 725 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 SH3BP4Q9P0V3 963 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 FZD10Q9ULW2 581 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 SPAM1P38567 509 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 DPYSL2Q16555 572 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 MPP5Q8N3R9 675 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 ERVK-5Q9HDB9 667 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 TMPRSS4Q9NRS4 437 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 RAI2Q9Y5P3 530 aa16.87■□□□□ 0.29
PCDHA13-202ENST00000409494 TRAFD1O14545 582 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 TNNI3P19429 210 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 TFEBP19484 476 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 ERVK-21P61565 698 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 KCNJ2P63252 427 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 TMCO5AQ8N6Q1 288 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 SELENOMQ8WWX9 145 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 E9PBE3 544 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 KLHL41O60662 606 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 PIGNO95427 931 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 CPSF4O95639 269 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 TFE3P19532 575 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 MC4RP32245 332 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 GHRHRQ02643 423 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 INCA1Q0VD86 236 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 RALGPS1Q5JS13 557 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 C17orf99Q6UX52 265 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 FAM126BQ8IXS8 530 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 ACTRT2Q8TDY3 377 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 DZANK1Q9NVP4 752 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 YIPF1Q9Y548 306 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 PHGDHO43175 533 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 USP1O94782 785 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 ETS1P14921 441 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 FASTKQ14296 549 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 PDK4Q16654 411 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 INTS11Q5TA45 600 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 CDK20Q8IZL9 346 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 KLHL4Q9C0H6 718 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 SCHIP1Q9P0W5 487 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 PER2O15055 1255 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 NTSP30990 170 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 DGKGP49619 791 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 CACNG1Q06432 222 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 QPCTQ16769 361 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 SWT1Q5T5J6 900 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 C16orf70Q9BSU1 422 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 FBXO6Q9NRD1 293 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 IMPAD1Q9NX62 359 aa16.86■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF33AQ06730 810 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CLP1Q92989 425 aaKnown RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CEP295NLQ96MC4 621 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 DACH2Q96NX9 599 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CEP44Q9C0F1 390 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 DPEP3Q9H4B8 488 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 SPATA31D3P0C874 917 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 PKMP14618 531 aaKnown RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CHRNB2P17787 502 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CCDC88AQ3V6T2 1871 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 SAMD4BQ5PRF9 694 aaKnown RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 SPATA31D4Q6ZUB0 917 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 DIS3LQ8TF46 1054 aaKnown RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CYGBQ8WWM9 190 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 ACE2Q9BYF1 805 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms