RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 CARNMT1Q8N4J0 409 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 FIBCD1Q8N539 461 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 MAB21L3Q8N8X9 362 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ZNF398Q8TD17 642 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 HDAC10Q969S8 669 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TMA16Q96EY4 203 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ELMO2Q96JJ3 720 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SCYL1Q96KG9 808 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TBATAQ96M53 351 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TSNARE1Q96NA8 513 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TASP1Q9H6P5 420 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SUDS3Q9H7L9 328 aaPredicted RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 KCNK13Q9HB14 408 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 PDFQ9HBH1 243 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 NOD2Q9HC29 1040 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 MRM3Q9HC36 420 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SLC40A1Q9NP59 571 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 THAP1Q9NVV9 213 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 COPG2Q9UBF2 871 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SEPT3Q9UH03 358 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ZFP69BQ9UJL9 534 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 RUVBL2Q9Y230 463 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 CPQQ9Y646 472 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 GREB1Q4ZG55 1949 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 DOCK4Q8N1I0 1966 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 LOC285095A0A1B0GVY8 99 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ILVBLA1L0T0 632 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 OR51F1A6NGY5 319 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 KIAA0355O15063 1070 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 WIPF1O43516 503 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 KDELR3O43731 214 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SNAP91O60641 907 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 CBX6O95503 412 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 LRG1P02750 347 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ATXN1LP0C7T5 689 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 FGF3P11487 239 aaPredicted RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TARSP26639 723 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SERPINB3P29508 390 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 MAGEA12P43365 314 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 PPP3CCP48454 512 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 CD151P48509 253 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SLC1A6P48664 564 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ARSDP51689 593 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SLC12A2P55011 1212 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TAS2R39P59534 338 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 SH3BP2P78314 561 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ZXDBP98169 803 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 FOXK2Q01167 660 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 CCDC15Q0P6D6 951 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 MSLNQ13421 630 aaPredicted RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 CCDC153Q494R4 210 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TTC31Q49AM3 519 aaPredicted RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 PABPC1LQ4VXU2 614 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ZNF789Q5FWF6 425 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 FSCBQ5H9T9 825 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 Q6ZNB5 142 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ITIH5Q86UX2 942 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 HERC6Q8IVU3 1022 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 KLHL23Q8NBE8 558 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 PDCD6IPQ8WUM4 868 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 KCTD4Q8WVF5 259 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 MRPS31Q92665 395 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ISL2Q96A47 359 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ARMC5Q96C12 935 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 RMDN1Q96DB5 314 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 C7orf26Q96N11 449 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ZNF599Q96NL3 588 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 NDNQ99608 321 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 DDX50Q9BQ39 737 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 MCMBPQ9BTE3 642 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 NMRAL1Q9HBL8 299 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 HAO1Q9UJM8 370 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ARL5AQ9Y689 179 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 NUMBLQ9Y6R0 609 aa4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 TANC1Q9C0D5 1861 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 SNNO75324 88 aaPredicted RBP4□□□□□ -1.77
LRRTM4-201ENST00000409088 UNC5CO95185 931 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 FGBP02675 491 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 SLC4A1P02730 911 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 SERPINE1P05121 402 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 CTSAP10619 480 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 STMN1P16949 149 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 HLA-DPA1P20036 260 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 MZF1P28698 734 aaPredicted RBP4□□□□□ -1.77
LRRTM4-201ENST00000409088 HADHAP40939 763 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 AQP5P55064 265 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 KCNJ2P63252 427 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 RBM20Q5T481 1227 aaKnown RBP4□□□□□ -1.77
LRRTM4-201ENST00000409088 MBLAC2Q68D91 279 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 CXorf57Q6NSI4 855 aaKnown RBP4□□□□□ -1.77
LRRTM4-201ENST00000409088 GAREM2Q75VX8 874 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 CLEC14AQ86T13 490 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 CEP97Q8IW35 865 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 MFSD6LQ8IWD5 586 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 CNTN4Q8IWV2 1026 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 C2CD4AQ8NCU7 369 aaPredicted RBP4□□□□□ -1.77
LRRTM4-201ENST00000409088 OR13J1Q8NGT2 312 aa4□□□□□ -1.77
LRRTM4-201ENST00000409088 RAB3IL1Q8TBN0 382 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms