RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 WNT3AP56704 352 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 GEMIN4P57678 1058 aaKnown RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 SEMG2Q02383 582 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 TRAF2Q12933 501 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 PRPSAP1Q14558 356 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 EIF4HQ15056 248 aaKnown RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 MYLK3Q32MK0 819 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 PREPLQ4J6C6 727 aaPredicted RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 GLE1Q53GS7 698 aaKnown RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 HP1BP3Q5SSJ5 553 aaPredicted RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 C9orf64Q5T6V5 341 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 RNASEH2BQ5TBB1 312 aaKnown RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 TCEAL6Q6IPX3 200 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 CCDC70Q6NSX1 233 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 KIAA1211LQ6NV74 962 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 KDELC1Q6UW63 502 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 ZDHHC24Q6UX98 284 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 SYDE1Q6ZW31 735 aaPredicted RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 CACUL1Q86Y37 369 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 TXNDC5Q8NBS9 432 aaKnown RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 OR2AP1Q8NGE2 309 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 OR2A12Q8NGT7 310 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 RPLP0P6Q8NHW5 317 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 GRIN3AQ8TCU5 1115 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 PDCD6IPQ8WUM4 868 aaKnown RBP8.43□□□□□ -1.06
GPC3-203ENST00000406757 TCEAL3Q969E4 200 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 LRRC45Q96CN5 670 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 SNF8Q96H20 258 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 LOXL4Q96JB6 756 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 NUDCD1Q96RS6 583 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 RAB17Q9H0T7 212 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 SLC25A51Q9H1U9 297 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 SLC6A17Q9H1V8 727 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 TMEM245Q9H330 911 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 PRSS16Q9NQE7 514 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 GDF3Q9NR23 364 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 ANGPTL2Q9UKU9 493 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 CHKBQ9Y259 395 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 EPG5Q9HCE0 2579 aa8.43□□□□□ -1.06
GPC3-203ENST00000406757 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 TM4SF5O14894 197 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 TP73O15350 636 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 MAP3K7O43318 606 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 ADAM23O75077 832 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 AVILO75366 819 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 SEC31AO94979 1220 aaKnown RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 GSRP00390 522 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 UGT2B4P06133 528 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 CTSLP07711 333 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PDHA1P08559 390 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 MYBL2P10244 700 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 HNRNPLP14866 589 aaKnown RBP eCLIP8.42□□□□□ -1.061e-7■■■□□ 16.3
GPC3-203ENST00000406757 CTPS1P17812 591 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 ITIH2P19823 946 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PMLP29590 882 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 SLC8A1P32418 973 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 FDFT1P37268 417 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 MPLP40238 635 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 RECQLP46063 649 aaPredicted RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 GEMP55040 296 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 SNRPD1P62314 119 aaKnown RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 VSNL1P62760 191 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 NSUN2Q08J23 767 aaKnown RBP eCLIP8.42□□□□□ -1.06
GPC3-203ENST00000406757 SEMA5AQ13591 1074 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 GALNT3Q14435 633 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 HLTFQ14527 1009 aaKnown RBP eCLIP8.42□□□□□ -1.06
GPC3-203ENST00000406757 KCNJ11Q14654 390 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 HNRNPA1L2Q32P51 320 aaKnown RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 PLK5Q496M5 336 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 LRRC73Q5JTD7 316 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 FNBP1LQ5T0N5 605 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 STPG1Q5TH74 334 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 DENND2CQ68D51 928 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 HIBCHQ6NVY1 386 aaPredicted RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 MICALCLQ6ZW33 695 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PPIL6Q8IXY8 311 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 IFT20Q8IY31 132 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PCDH20Q8N6Y1 951 aaKnown RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 PAF1Q8N7H5 531 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 NAT8LQ8N9F0 302 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 IL17RCQ8NAC3 791 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 MYRIPQ8NFW9 859 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 OR52K1Q8NGK4 314 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 FBXO25Q8TCJ0 367 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PRCCQ92733 491 aaPredicted RBP8.42□□□□□ -1.06
GPC3-203ENST00000406757 ART4Q93070 314 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 VOPP1Q96AW1 172 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 MRGPRX2Q96LB1 330 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 GDAP1L1Q96MZ0 367 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 KLHL32Q96NJ5 620 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 FAM129BQ96TA1 746 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 HEPHQ9BQS7 1158 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 PARD6BQ9BYG5 372 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 CEP44Q9C0F1 390 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 FAM153AQ9UHL3 310 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 SARDHQ9UL12 918 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 NFU1Q9UMS0 254 aa8.42□□□□□ -1.06
GPC3-203ENST00000406757 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms