RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 FESP07332 822 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 DSC2Q02487 901 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 CRHR2Q13324 411 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 TRIP4Q15650 581 aaPredicted RBP23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 DDR2Q16832 855 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 CATSPER1Q8NEC5 780 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 KLHDC9Q8NEP7 349 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 PABPC5Q96DU9 382 aaKnown RBP23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 GMIPQ9P107 970 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 DTNAQ9Y4J8 743 aa23.22■■□□□ 1.31
RABGGTA-202ENST00000399409 MIA3Q5JRA6 1907 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 NEMP2A6NFY4 417 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 CFLARO15519 480 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 AHCYL1O43865 530 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 RNASEH1O60930 286 aaKnown RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 HAPLN1P10915 354 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 HNRNPLP14866 589 aaKnown RBP eCLIP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 VCLP18206 1134 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 FCGRTP55899 365 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 IL10RBQ08334 325 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 CEACAM7Q14002 265 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 SQLEQ14534 574 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 ZNF280DQ6N043 979 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 SPPL2BQ8TCT7 592 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 MARK4Q96L34 752 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 KLHL5Q96PQ7 755 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 MRPL1Q9BYD6 325 aaKnown RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 BCAS2O75934 225 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 HOXB8P17481 243 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 XRCC1P18887 633 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 INHBCP55103 352 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 MAXP61244 160 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 STX5Q13190 355 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 GRAMD1BQ3KR37 738 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 ALFQ53S48 1182 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 SDHAF4Q5VUM1 108 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 CUZD1Q86UP6 607 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 ZNF280BQ86YH2 543 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 RNF135Q8IUD6 432 aa23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 ST13P4Q8IZP2 240 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-202ENST00000399409 LOC285095A0A1B0GVY8 99 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 DRGXA6NNA5 263 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 CNTN5O94779 1100 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 WISP3O95389 354 aaPredicted RBP23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 S1PR4O95977 384 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 ZCCHC18P0CG32 403 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 PRAMEP78395 509 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 EFEMP1Q12805 493 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 PARP15Q460N3 678 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 MMEL1Q495T6 779 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 SIRPB2Q5JXA9 342 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 FAM45BPQ6NSW5 357 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 RGMBQ6NW40 437 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 PTAR1Q7Z6K3 402 aaPredicted RBP23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 OR6P1Q8NGX9 317 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 ARRDC2Q8TBH0 407 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 FAM45AQ8TCE6 357 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 PEX13Q92968 403 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 PSMG2Q969U7 264 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 CYP4F12Q9HCS2 524 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 IMPDH1P20839 514 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 CST5P28325 142 aaPredicted RBP23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 GPR15P49685 360 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 RARS2Q5T160 578 aaKnown RBP23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 CCSAPQ6IQ19 270 aaPredicted RBP23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 ZNF354CQ86Y25 554 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 COLGALT2Q8IYK4 626 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 HDAC10Q969S8 669 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 LRGUKQ96M69 825 aa23.2■■□□□ 1.3
RABGGTA-202ENST00000399409 FAM92AA1XBS5 289 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 TRIM38O00635 465 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 SYN3O14994 580 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 B4GALT3O60512 393 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 KCNA5P22460 613 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 PEX19P40855 299 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 PKNOX1P55347 436 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 FBXL22Q6P050 247 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 PHC3Q8NDX5 983 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 L3HYPDHQ96EM0 354 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 DDX50Q9BQ39 737 aaKnown RBP23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 SLC24A3Q9HC58 644 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 TRPC7Q9HCX4 862 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 HACD3Q9P035 362 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 UXTQ9UBK9 157 aaPredicted RBP23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 PACSIN3Q9UKS6 424 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 DOCK4Q8N1I0 1966 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 UBDO15205 165 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 YWHAQP27348 245 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 PSMD8P48556 350 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 YBEYP58557 167 aaPredicted RBP23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 ACVR1Q04771 509 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 BTG3Q14201 252 aaPredicted RBP23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 ADGRE1Q14246 886 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 SLC24A5Q71RS6 500 aa23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 PCSK9Q8NBP7 692 aaKnown RBP23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 SUDS3Q9H7L9 328 aaPredicted RBP23.19■■□□□ 1.3
RABGGTA-202ENST00000399409 RAMP2O60895 175 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 RTN3O95197 1032 aaPredicted RBP23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 MYCNP04198 464 aaPredicted RBP23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 ATXN1LP0C7T5 689 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms