RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 SPAG6O75602 509 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 PIGNO95427 931 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 CRTAMO95727 393 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 EGFP01133 1207 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 UGT2B4P06133 528 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 HLA-EP13747 358 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 NTSR1P30989 418 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 ADRA1AP35348 466 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 ELK3P41970 407 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 GRIA1P42261 906 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 IL12RB1P42701 662 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 GRIA4P48058 902 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 CCDC15Q0P6D6 951 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 TRAF2Q12933 501 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 MTM1Q13496 603 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 GALNT3Q14435 633 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 HSF5Q4G112 596 aaPredicted RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 C2orf27AQ580R0 203 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 PCID2Q5JVF3 399 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 SPDYCQ5MJ68 293 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 EOGTQ5NDL2 527 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 ARMC3Q5W041 872 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 TXNDC11Q6PKC3 985 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 RANBP10Q6VN20 620 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 NLRP9Q7RTR0 991 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 HDXQ7Z353 690 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 CAND1Q86VP6 1230 aaKnown RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 CAMK1DQ8IU85 385 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 ANKMY2Q8IV38 441 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 ZNF366Q8N895 744 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 FBXO36Q8NEA4 188 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 OR2A12Q8NGT7 310 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 GABPB2Q8TAK5 448 aaPredicted RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 FRS2Q8WU20 508 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 PTPRN2Q92932 1015 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 TADA1Q96BN2 335 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 CFAP36Q96G28 342 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 PWWP2AQ96N64 755 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 CDC42EP4Q9H3Q1 356 aaKnown RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 ARNT2Q9HBZ2 717 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 PIH1D1Q9NWS0 290 aaKnown RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 HACD3Q9P035 362 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 WNT16Q9UBV4 365 aa14.31□□□□□ -0.12
SKA1-202ENST00000398452 ZC3H7BQ9UGR2 993 aaKnown RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 NDRG2Q9UN36 371 aaKnown RBP14.31□□□□□ -0.12
SKA1-202ENST00000398452 HEATR9A2RTY3 570 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 K7EQS6 105 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 TK2O00142 265 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 KPNA3O00505 521 aaPredicted RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 TP73O15350 636 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 SIN3BO75182 1162 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 AVILO75366 819 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 ZNF821O75541 412 aaPredicted RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 GJB3O75712 270 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 PGLSO95336 258 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 TTC4O95801 387 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 POLBP06746 335 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 GSTA2P09210 222 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 TSHRP16473 764 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 TPH1P17752 444 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 PGAM1P18669 254 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 PAMP19021 973 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 ADRA1DP25100 572 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 PDE1BQ01064 536 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 IFFO1Q0D2I5 559 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 MESP2Q0VG99 397 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 SFSWAPQ12872 951 aaKnown RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 OLIG2Q13516 323 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 POU6F1Q14863 301 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 HP1BP3Q5SSJ5 553 aaPredicted RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 BEND6Q5SZJ8 279 aaPredicted RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 FSTL4Q6MZW2 842 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 BRAT1Q6PJG6 821 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 ADGRD1Q6QNK2 874 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 USP45Q70EL2 814 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 RELL1Q8IUW5 271 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 STK40Q8N2I9 435 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 MREGQ8N565 214 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 CHST14Q8NCH0 376 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 BLOC1S5Q8TDH9 187 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 ANKRD7Q92527 254 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 C9orf72Q96LT7 481 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 KLHL32Q96NJ5 620 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 NELL2Q99435 816 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 EBNA1BP2Q99848 306 aaKnown RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 TMEM245Q9H330 911 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 PABPC3Q9H361 631 aaKnown RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 FBRSQ9HAH7 460 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 FBRSL1Q9HCM7 1045 aaKnown RBP14.3□□□□□ -0.12
SKA1-202ENST00000398452 FAM86C1Q9NVL1 165 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 PHTF1Q9UMS5 762 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 TICRRQ7Z2Z1 1910 aa14.3□□□□□ -0.12
SKA1-202ENST00000398452 C2orf81A6NN90 581 aa14.29□□□□□ -0.12
SKA1-202ENST00000398452 ANKRD66B4E2M5 251 aa14.29□□□□□ -0.12
SKA1-202ENST00000398452 LEFTY1O75610 366 aa14.29□□□□□ -0.12
SKA1-202ENST00000398452 ACSL3O95573 720 aa14.29□□□□□ -0.12
SKA1-202ENST00000398452 KLF8O95600 359 aaPredicted RBP14.29□□□□□ -0.12
SKA1-202ENST00000398452 IL1BP01584 269 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms