RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 BUB1O43683 1085 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 KDELR3O43731 214 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 MMP20O60882 483 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 GCATO75600 419 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 C1QL1O75973 258 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 TMCC1O94876 653 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 POP4O95707 220 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 GP1BAP07359 652 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 KRT3P12035 628 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 UNGP13051 313 aaPredicted RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 RFC1P35251 1148 aaPredicted RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 IGFALSP35858 605 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 PTPN9P43378 593 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 EPHA4P54764 986 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 GEMIN4P57678 1058 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 PFN3P60673 137 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 CXADRP78310 365 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 PTP4A2Q12974 167 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ZCCHC8Q6NZY4 707 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 WDR59Q6PJI9 974 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 GDPD4Q6W3E5 623 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 STRADAQ7RTN6 431 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 GPR155Q7Z3F1 870 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 TTC7BQ86TV6 843 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ZSCAN1Q8NBB4 408 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ENOX1Q8TC92 643 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 CENPIQ92674 756 aaPredicted RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 CENPTQ96BT3 561 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 SELENOOQ9BVL4 669 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 NOL6Q9H6R4 1146 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ADAM22Q9P0K1 906 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 SCHIP1Q9P0W5 487 aaPredicted RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 PNMA8BQ9ULN7 279 aaPredicted RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 CSNK1G3Q9Y6M4 447 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF462Q96JM2 2506 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 COL6A6A6NMZ7 2263 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ARHGEF17Q96PE2 2063 aaPredicted RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 A0A1W2PNU3 283 aaPredicted RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 CDK2AP1O14519 115 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 AREL1O15033 823 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 MUSKO15146 869 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 INSIG1O15503 277 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 GPD1P21695 349 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 STAT1P42224 750 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 LSSP48449 732 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ADKP55263 362 aaKnown RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 PCBP4P57723 403 aaKnown RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 C19orf57Q0VDD7 668 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 NR0B2Q15466 257 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 TCEA2Q15560 299 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ISXQ2M1V0 245 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 PRRT3Q5FWE3 981 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 C3orf38Q5JPI3 329 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 PERM1Q5SV97 790 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 CDKAL1Q5VV42 579 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 SCYL2Q6P3W7 929 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 TRIM72Q6ZMU5 477 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 SLFN11Q7Z7L1 901 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ZSCAN30Q86W11 494 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF248Q8NDW4 579 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 DENND6BQ8NEG7 585 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 CXorf40AQ8TE69 158 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ZDHHC1Q8WTX9 485 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ASB12Q8WXK4 309 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 HMCESQ96FZ2 354 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ATXN7L3BQ96GX2 97 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 HIC2Q96JB3 615 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF578Q96N58 590 aaPredicted RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 IL12RB2Q99665 862 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 WRAP53Q9BUR4 548 aaKnown RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 OSBPL1AQ9BXW6 950 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 TSPAN10Q9H1Z9 355 aaPredicted RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 RETREG1Q9H6L5 497 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 POLR1BQ9H9Y6 1135 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 USP29Q9HBJ7 922 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 CPNE5Q9HCH3 593 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 MBNL1Q9NR56 388 aaKnown RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 SEPT11Q9NVA2 429 aaKnown RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 SPASTQ9UBP0 616 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 APOBEC3BQ9UH17 382 aaKnown RBP9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 SATB2Q9UPW6 733 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 SIK3Q9Y2K2 1263 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 COQ6Q9Y2Z9 468 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 LRP4O75096 1905 aa9.92□□□□□ -0.82
NIFKP1-201ENST00000398317 AHCTF1Q8WYP5 2266 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 CXorf51AA0A1B0GTR3 108 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 PMS2P1A4D2B8 440 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 EME2A4GXA9 379 aaPredicted RBP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 RASA4BC9J798 803 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 CCP110O43303 1012 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 RASA4O43374 803 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 CREB3O43889 395 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 TM7SF2O76062 418 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 PIGNO95427 931 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 IGSF6O95976 241 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 TPM2P07951 284 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 CELA2BP08218 269 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms