RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ACTL7AQ9Y615 435 aa15.04■□□□□ -0
CBX3-202ENST00000396386 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.03■□□□□ -0
CBX3-202ENST00000396386 CCL22O00626 93 aa15.03■□□□□ -0
CBX3-202ENST00000396386 RPP40O75818 363 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 ENO1P06733 434 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 MYL4P12829 197 aa15.03■□□□□ -0
CBX3-202ENST00000396386 DLG1Q12959 904 aa15.03■□□□□ -0
CBX3-202ENST00000396386 RCN2Q14257 317 aa15.03■□□□□ -0
CBX3-202ENST00000396386 ZNF789Q5FWF6 425 aa15.03■□□□□ -0
CBX3-202ENST00000396386 CFAP157Q5JU67 520 aa15.03■□□□□ -0
CBX3-202ENST00000396386 RNF219Q5W0B1 726 aaPredicted RBP15.03■□□□□ -0
CBX3-202ENST00000396386 CXorf57Q6NSI4 855 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 ZNF783Q6ZMS7 281 aa15.03■□□□□ -0
CBX3-202ENST00000396386 C16orf59Q7L2K0 433 aa15.03■□□□□ -0
CBX3-202ENST00000396386 TREML1Q86YW5 311 aa15.03■□□□□ -0
CBX3-202ENST00000396386 ZNF781Q8N8C0 355 aa15.03■□□□□ -0
CBX3-202ENST00000396386 BRSK1Q8TDC3 778 aa15.03■□□□□ -0
CBX3-202ENST00000396386 DNAJC1Q96KC8 554 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 CCDC106Q9BWC9 280 aa15.03■□□□□ -0
CBX3-202ENST00000396386 CD248Q9HCU0 757 aa15.03■□□□□ -0
CBX3-202ENST00000396386 SCUBE2Q9NQ36 999 aa15.03■□□□□ -0
CBX3-202ENST00000396386 TAGLN3Q9UI15 199 aa15.03■□□□□ -0
CBX3-202ENST00000396386 KCTD3Q9Y597 815 aa15.03■□□□□ -0
CBX3-202ENST00000396386 TARM1B6A8C7 271 aa15.03■□□□□ -0
CBX3-202ENST00000396386 CBX4O00257 560 aa15.03■□□□□ -0
CBX3-202ENST00000396386 GYG2O15488 501 aa15.03■□□□□ -0
CBX3-202ENST00000396386 INSIG1O15503 277 aa15.03■□□□□ -0
CBX3-202ENST00000396386 CSF2RAP15509 400 aa15.03■□□□□ -0
CBX3-202ENST00000396386 CES1P23141 567 aa15.03■□□□□ -0
CBX3-202ENST00000396386 RGRP47804 291 aa15.03■□□□□ -0
CBX3-202ENST00000396386 GRIA4P48058 902 aa15.03■□□□□ -0
CBX3-202ENST00000396386 IDH3AP50213 366 aa15.03■□□□□ -0
CBX3-202ENST00000396386 HK2P52789 917 aa15.03■□□□□ -0
CBX3-202ENST00000396386 SMAD3P84022 425 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 NSUN2Q08J23 767 aaKnown RBP eCLIP15.03■□□□□ -0
CBX3-202ENST00000396386 TMEM150AQ86TG1 271 aa15.03■□□□□ -0
CBX3-202ENST00000396386 TDRD5Q8NAT2 981 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 HJURPQ8NCD3 748 aaPredicted RBP15.03■□□□□ -0
CBX3-202ENST00000396386 FAM13CQ8NE31 585 aa15.03■□□□□ -0
CBX3-202ENST00000396386 SCG3Q8WXD2 468 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 ZNF333Q96JL9 665 aa15.03■□□□□ -0
CBX3-202ENST00000396386 ZFRQ96KR1 1074 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 NUDCD1Q96RS6 583 aa15.03■□□□□ -0
CBX3-202ENST00000396386 YME1L1Q96TA2 773 aa15.03■□□□□ -0
CBX3-202ENST00000396386 OLFM1Q99784 485 aa15.03■□□□□ -0
CBX3-202ENST00000396386 MRPL57Q9BQC6 102 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 DRC3Q9H069 523 aa15.03■□□□□ -0
CBX3-202ENST00000396386 ZNF334Q9HCZ1 680 aaPredicted RBP15.03■□□□□ -0
CBX3-202ENST00000396386 MARCH4Q9P2E8 410 aaPredicted RBP15.03■□□□□ -0
CBX3-202ENST00000396386 RPL26L1Q9UNX3 145 aaKnown RBP15.03■□□□□ -0
CBX3-202ENST00000396386 ARIH1Q9Y4X5 557 aaPredicted RBP15.03■□□□□ -0
CBX3-202ENST00000396386 ARL5AQ9Y689 179 aa15.03■□□□□ -0
CBX3-202ENST00000396386 TYW5A2RUC4 315 aaKnown RBP15.02■□□□□ -0
CBX3-202ENST00000396386 OR51F1A6NGY5 319 aa15.02■□□□□ -0
CBX3-202ENST00000396386 ZNF195O14628 629 aa15.02■□□□□ -0
CBX3-202ENST00000396386 GLP2RO95838 553 aa15.02■□□□□ -0
CBX3-202ENST00000396386 S1PR4O95977 384 aa15.02■□□□□ -0
CBX3-202ENST00000396386 TIMP1P01033 207 aa15.02■□□□□ -0
CBX3-202ENST00000396386 F11P03951 625 aa15.02■□□□□ -0
CBX3-202ENST00000396386 CR2P20023 1033 aa15.02■□□□□ -0
CBX3-202ENST00000396386 LRRC26Q2I0M4 334 aa15.02■□□□□ -0
CBX3-202ENST00000396386 FAM83EQ2M2I3 478 aa15.02■□□□□ -0
CBX3-202ENST00000396386 HECTD2Q5U5R9 776 aa15.02■□□□□ -0
CBX3-202ENST00000396386 AGAP9Q5VTM2 703 aa15.02■□□□□ -0
CBX3-202ENST00000396386 FAM45BPQ6NSW5 357 aa15.02■□□□□ -0
CBX3-202ENST00000396386 KLC3Q6P597 504 aa15.02■□□□□ -0
CBX3-202ENST00000396386 RINLQ6ZS11 566 aa15.02■□□□□ -0
CBX3-202ENST00000396386 GPR65Q8IYL9 337 aa15.02■□□□□ -0
CBX3-202ENST00000396386 TEX9Q8N6V9 391 aa15.02■□□□□ -0
CBX3-202ENST00000396386 FAM45AQ8TCE6 357 aa15.02■□□□□ -0
CBX3-202ENST00000396386 HEXDCQ8WVB3 486 aa15.02■□□□□ -0
CBX3-202ENST00000396386 EXOC2Q96KP1 924 aa15.02■□□□□ -0
CBX3-202ENST00000396386 TBATAQ96M53 351 aa15.02■□□□□ -0
CBX3-202ENST00000396386 CADM1Q9BY67 442 aaKnown RBP15.02■□□□□ -0
CBX3-202ENST00000396386 ILKAPQ9H0C8 392 aaPredicted RBP15.02■□□□□ -0
CBX3-202ENST00000396386 C11orf49Q9H6J7 331 aa15.02■□□□□ -0
CBX3-202ENST00000396386 IGSF5Q9NSI5 407 aa15.02■□□□□ -0
CBX3-202ENST00000396386 CORO1CQ9ULV4 474 aaPredicted RBP15.02■□□□□ -0
CBX3-202ENST00000396386 RAP2CQ9Y3L5 183 aa15.02■□□□□ -0
CBX3-202ENST00000396386 HELZP42694 1942 aaKnown RBP15.02□□□□□ -0.01
CBX3-202ENST00000396386 SPECC1L-ADORA2AF8WAN1 911 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 TEX28O15482 410 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 DLX3O60479 287 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 DIAPH2O60879 1101 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 TBL1XO60907 577 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 CRTAMO95727 393 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 GOT2P00505 430 aaKnown RBP15.01□□□□□ -0.01
CBX3-202ENST00000396386 C1RP00736 705 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 LTA4HP09960 611 aaKnown RBP15.01□□□□□ -0.01
CBX3-202ENST00000396386 HOXB8P17481 243 aaPredicted RBP15.01□□□□□ -0.01
CBX3-202ENST00000396386 AOC1P19801 751 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 OGNP20774 298 aaKnown RBP15.01□□□□□ -0.01
CBX3-202ENST00000396386 SCNN1BP51168 640 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 USP4Q13107 963 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 UBAP2LQ14157 1087 aaKnown RBP15.01□□□□□ -0.01
CBX3-202ENST00000396386 CSHL1Q14406 222 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 CYTH1Q15438 398 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 PABPC1LQ4VXU2 614 aaKnown RBP15.01□□□□□ -0.01
CBX3-202ENST00000396386 TECRLQ5HYJ1 363 aa15.01□□□□□ -0.01
CBX3-202ENST00000396386 MRNIPQ6NTE8 343 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms