RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TRAF2Q12933 501 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 OLIG2Q13516 323 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 TTMPQ5BVD1 217 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 GDPD4Q6W3E5 623 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 ZNF513Q8N8E2 541 aaPredicted RBP13.78□□□□□ -0.2
VAPB-202ENST00000395802 OR6K2Q8NGY2 324 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PTPRN2Q92932 1015 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CFAP36Q96G28 342 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PPP1R16AQ96I34 528 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 HEBP1Q9NRV9 189 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 THEGQ9P2T0 379 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 TCAF1Q9Y4C2 921 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 TRAFD1O14545 582 aaPredicted RBP13.77□□□□□ -0.21
VAPB-202ENST00000395802 ASGR2P07307 311 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 SSTR1P30872 391 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 CHRNA4P43681 627 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 GALNT3Q14435 633 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 TMEM196Q5HYL7 178 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 STEAP4Q687X5 459 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 UNC5AQ6ZN44 842 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 USP45Q70EL2 814 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 MPP5Q8N3R9 675 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
VAPB-202ENST00000395802 TMIEQ8NEW7 156 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 ARL8AQ96BM9 186 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 ECHDC3Q96DC8 303 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 ACSS3Q9H6R3 686 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 FBRSQ9HAH7 460 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 MAGEE1Q9HCI5 957 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
VAPB-202ENST00000395802 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 MIA3Q5JRA6 1907 aa13.77□□□□□ -0.21
VAPB-202ENST00000395802 EXOC1LA0A1B0GW35 172 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 TCRBV9S1A1TA0A576 114 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 GOLGA8KD6RF30 607 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 SYNCRIPO60506 623 aaKnown RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 RNASEH1O60930 286 aaKnown RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 TCEA3O75764 348 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 ALDH1A2O94788 518 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 PRLP01236 227 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 GPX6P59796 221 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 CRADDP78560 199 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 CCDC15Q0P6D6 951 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 IHHQ14623 411 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 CRYMQ14894 314 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 TAF1AQ15573 450 aaPredicted RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 SLC44A4Q53GD3 710 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 IGDCC3Q8IVU1 814 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 RIBC1Q8N443 379 aaPredicted RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 BLOC1S5Q8TDH9 187 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 TMEM109Q9BVC6 243 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 STMN4Q9H169 189 aaPredicted RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 DKK3Q9UBP4 350 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 FAM169AQ9Y6X4 670 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 TICRRQ7Z2Z1 1910 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 C1QTNF3-AMACRE9PGA6 284 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 LEFTY1O75610 366 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 PIGNO95427 931 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 UGT2B4P06133 528 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 EPHX1P07099 455 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 PDHA1P08559 390 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 MYZAPP0CAP1 466 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 SUOXP51687 545 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 MRPS21P82921 87 aaKnown RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 TFF2Q03403 129 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 MESP2Q0VG99 397 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 NAB1Q13506 487 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 ENPP2Q13822 863 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 SEPT6Q14141 434 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 STARD3Q14849 445 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 LONRF1Q17RB8 773 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 ZNF805Q5CZA5 627 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 PDPK2PQ6A1A2 396 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 CAPN12Q6ZSI9 719 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 GLT6D1Q7Z4J2 308 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 AGGF1Q8N302 714 aaeCLIP13.76□□□□□ -0.21
VAPB-202ENST00000395802 FBF1Q8TES7 1133 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 FAM3CQ92520 227 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 ZNF669Q96BR6 464 aaPredicted RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 WDR83Q9BRX9 315 aaKnown RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 TMBIM4Q9HC24 238 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 PPANQ9NQ55 473 aaKnown RBP13.76□□□□□ -0.21
VAPB-202ENST00000395802 DYRK4Q9NR20 520 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 NSMCE4AQ9NXX6 385 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 SLC24A2Q9UI40 661 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms