RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TUBGCP3Q96CW5 907 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 CASS4Q9NQ75 786 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 RAI2Q9Y5P3 530 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 C1orf232A0A0U1RR37 186 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CD3EAPO15446 510 aaKnown RBP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 TPST1O60507 370 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 KRT36O76013 467 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 ARSAP15289 507 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 MAP2K2P36507 400 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 RALGPS1Q5JS13 557 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 ZNF461Q8TAF7 563 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 TRPC4APQ8TEL6 797 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 PYDC1Q8WXC3 89 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 FCRL5Q96RD9 977 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 TLE6Q9H808 572 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 FKBPLQ9UIM3 349 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 MOSPD1Q9UJG1 213 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 ZCWPW2A0A1B0GU75 182 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CCDC162PA2VCL2 907 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 PFDN6O15212 129 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 C8AP07357 584 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 SLC6A4P31645 630 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CREB5Q02930 508 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 DSC1Q08554 894 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 ZC3HC1Q86WB0 502 aaKnown RBP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CNPY4Q8N129 248 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CLDN19Q8N6F1 224 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 RTP4Q96DX8 246 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 C8orf48Q96LL4 319 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 MID1IP1Q9NPA3 183 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CATSPERZQ9NTU4 200 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 GIMAP2Q9UG22 337 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 ZNF180Q9UJW8 692 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 CDYLQ9Y232 598 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 URB1O60287 2271 aaKnown RBP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 TNFRSF10BO14763 440 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 INPPL1O15357 1258 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 TLL1O43897 1013 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 UGT1A6P19224 532 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 UGT1A1P22309 533 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 UGT1A4P22310 534 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 PBLDP30039 288 aaPredicted RBP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 UGT1A3P35503 534 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 UGT1A5P35504 534 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 MCCD1P59942 119 aaPredicted RBP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 SLC18A2Q05940 514 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 FSCBQ5H9T9 825 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 LRRC8EQ6NSJ5 796 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 POTEHQ6S545 545 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 RBM15BQ8NDT2 890 aaKnown RBP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 FAM13CQ8NE31 585 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 FBXO27Q8NI29 283 aa15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMARCD1-202ENST00000394963 GRK2P25098 689 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 PSEN1P49768 467 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 SGSHP51688 502 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 HECTD2Q5U5R9 776 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 FIBCD1Q8N539 461 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TCF25Q9BQ70 676 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 BTBD10Q9BSF8 475 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 PHACTR1Q9C0D0 580 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 ZMYM5Q9UJ78 669 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TIMM22Q9Y584 194 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CCDC160A6NGH7 325 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 AP3B1O00203 1094 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 RGRP47804 291 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CDKN1CP49918 316 aaPredicted RBP15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 IRF5Q13568 498 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TRIM71Q2Q1W2 868 aaKnown RBP15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 SLC9B1Q4ZJI4 515 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 SLC39A5Q6ZMH5 540 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TTC30BQ8N4P2 665 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 PTGR2Q8N8N7 351 aaPredicted RBP15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 FAM156AQ8NDB6 213 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 DPF3Q92784 378 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 WBP2Q969T9 261 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CCDC134Q9H6E4 229 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TRMT6Q9UJA5 497 aaKnown RBP15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 AK5Q9Y6K8 562 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 LRRC14BA6NHZ5 514 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TEX28O15482 410 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 ZBTB14O43829 449 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CRTAMO95727 393 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 MPOP05164 745 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CALB2P22676 271 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 MC4RP32245 332 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 SCAPQ12770 1279 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 PCLAFQ15004 111 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TCTN1Q2MV58 587 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 CCDC153Q494R4 210 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 FUT11Q495W5 492 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 AGKQ53H12 422 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 TSTD2Q5T7W7 516 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 OR52B2Q96RD2 323 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 HCFC1R1Q9NWW0 138 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
SMARCD1-202ENST00000394963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.96■□□□□ 0.15
SMARCD1-202ENST00000394963 DNAJC8O75937 253 aaPredicted RBP15.96■□□□□ 0.15
SMARCD1-202ENST00000394963 TSHRP16473 764 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms