RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 FESP07332 822 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 PIM1P11309 404 aaPredicted RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 ME2P23368 584 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 PKNOX1P55347 436 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 USP46P62068 366 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 TNK2Q07912 1038 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 EFEMP1Q12805 493 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 CRHR2Q13324 411 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 IHHQ14623 411 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 ACAP2Q15057 778 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 GRAMD1BQ3KR37 738 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 GLB1LQ6UWU2 654 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 CHSY3Q70JA7 882 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 SPNS2Q8IVW8 549 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 UBXN10Q96LJ8 280 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 GBP5Q96PP8 586 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 BTBD9Q96Q07 612 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 NPAS2Q99743 824 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 FAM192AQ9GZU8 254 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 DTNAQ9Y4J8 743 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 TMEM189-UBE2V1I3L0A0 370 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 AHCYL1O43865 530 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 WISP3O95389 354 aaPredicted RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 VCLP18206 1134 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 IRX1P78414 480 aaPredicted RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 DSC1Q08554 894 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 TRIM32Q13049 653 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 GK5Q6ZS86 529 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 CUZD1Q86UP6 607 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 SLC22A9Q8IVM8 553 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 ICA1LQ8NDH6 482 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 KLHDC9Q8NEP7 349 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 TADA1Q96BN2 335 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 MEAF6Q9HAF1 191 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 GABRQQ9UN88 632 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 NOD1Q9Y239 953 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 VWA7Q9Y334 891 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 FIS1Q9Y3D6 152 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 GRK4P32298 578 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 ARSDP51689 593 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 MRPS22P82650 360 aaKnown RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 MS4A2Q01362 244 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 GALNT1Q10472 559 aaPredicted RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 SQLEQ14534 574 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 TRIP4Q15650 581 aaPredicted RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 SIRPB2Q5JXA9 342 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 OR6P1Q8NGX9 317 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 ARRDC2Q8TBH0 407 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 DLG3Q92796 817 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 IGSF8Q969P0 613 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 HDAC10Q969S8 669 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 TMA16Q96EY4 203 aaKnown RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 TNFRSF12AQ9NP84 129 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 RGS18Q9NS28 235 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 TRMT13Q9NUP7 481 aaKnown RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 UTP6Q9NYH9 597 aaKnown RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 IL37Q9NZH6 218 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 UXTQ9UBK9 157 aaPredicted RBP12.37□□□□□ -0.43
RFC5-201ENST00000392542 PCDHB5Q9Y5E4 795 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
RFC5-201ENST00000392542 LOC285095A0A1B0GVY8 99 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 STX16-NPEPL1H3BU86 382 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 BCAS2O75934 225 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 S1PR4O95977 384 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 ATXN1LP0C7T5 689 aaKnown RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 SLC26A3P40879 764 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 MAGEA11P43364 429 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 OR1G1P47890 313 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 PLK1P53350 603 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 INHBCP55103 352 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 INHBEP58166 350 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 PRAMEP78395 509 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 IL10RBQ08334 325 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 ADGRE1Q14246 886 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 MAPRE2Q15555 327 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 MMEL1Q495T6 779 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 RAP1GAP2Q684P5 730 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 CCSAPQ6IQ19 270 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 FBXL22Q6P050 247 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 TMEM126BQ8IUX1 230 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 COLGALT2Q8IYK4 626 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 PGBD5Q8N414 524 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 PNPLA1Q8N8W4 532 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 BHLHE22Q8NFJ8 381 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 BTN2A3PQ96KV6 586 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 LRGUKQ96M69 825 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 TTC24A2A3L6 582 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 TRIM38O00635 465 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 EOMESO95936 686 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 CDKN2DP55273 166 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms