RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NEBLO76041 1014 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ZRANB2O95218 330 aaKnown RBP eCLIP9.33□□□□□ -0.926e-7■■□□□ 12.1
HMGN1-202ENST00000380747 PEX11BO96011 259 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SYPP08247 313 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 KRT10P13645 584 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ZFXP17010 805 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 MX2P20592 715 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SERPINA4P29622 427 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 GARSP41250 739 aaKnown RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 MMP13P45452 471 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 CSNK1DP48730 415 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 MARCKSL1P49006 195 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SCNN1BP51168 640 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 MAXP61244 160 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 BCL2L1Q07817 233 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ITKQ08881 620 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SLC10A2Q12908 348 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 GRM3Q14832 879 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TEAD4Q15561 434 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 UAP1L1Q3KQV9 507 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 LRRC73Q5JTD7 316 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SLC9A4Q6AI14 798 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TIGD7Q6NT04 549 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 NPNTQ6UXI9 565 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ADAT2Q7Z6V5 191 aaKnown RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TTC7BQ86TV6 843 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TRIM69Q86WT6 500 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 VSIG1Q86XK7 387 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 LRRC49Q8IUZ0 686 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 KATNAL2Q8IYT4 538 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 PGBD5Q8N414 524 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 CCDC112Q8NEF3 446 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 KIAA1524Q8TCG1 905 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 KRT35Q92764 455 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 RAB7BQ96AH8 199 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 RBM41Q96IZ5 413 aaKnown RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 SLC6A18Q96N87 628 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 PSKH2Q96QS6 385 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 MYOCQ99972 504 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 CPEB1Q9BZB8 566 aaKnown RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ATP13A3Q9H7F0 1226 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 EBF2Q9HAK2 575 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 CAPN10Q9HC96 672 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TM9SF3Q9HD45 589 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 NT5MQ9NPB1 228 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 DTLQ9NZJ0 730 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ITM2BQ9Y287 266 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TTLL3Q9Y4R7 772 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 FADS3Q9Y5Q0 445 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 A0A1B0GVT2 93 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 MUSKO15146 869 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 MATN3O15232 486 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SLC31A1O15431 190 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 AP1G1O43747 822 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 NRDCO43847 1150 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CST8O60676 142 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TRIM16O95361 564 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TOP3BO95985 862 aaKnown RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TIMP2P16035 220 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 PRLRP16471 622 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 ITIH2P19823 946 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SPINK2P20155 84 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CCNCP24863 283 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CDKN2BP42772 138 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CSNK1EP49674 416 aaKnown RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 AFF3P51826 1226 aaKnown RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 C21orf59P57076 290 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 AP1S1P61966 158 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 NSUN2Q08J23 767 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 AP1B1Q10567 949 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 GRIK2Q13002 908 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TFDP2Q14188 446 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SETMARQ53H47 684 aaPredicted RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SLC45A4Q5BKX6 768 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SEL1L3Q68CR1 1132 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 NAPEPLDQ6IQ20 393 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 NEK5Q6P3R8 708 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 LAYNQ6UX15 382 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 HORMAD1Q86X24 394 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CAMK1DQ8IU85 385 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 LRRC8AQ8IWT6 810 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CCDC13Q8IYE1 715 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 RCOR2Q8IZ40 523 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 PLD5Q8N7P1 536 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 OR2I1PQ8NGU4 316 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 EXD1Q8NHP7 514 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 C1orf216Q8TAB5 229 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 MAML1Q92585 1016 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 VOPP1Q96AW1 172 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 FEM1CQ96JP0 617 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 ZNF641Q96N77 438 aaPredicted RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TSGA13Q96PP4 275 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 NUDCD1Q96RS6 583 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TUBGCP5Q96RT8 1024 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 LGMNQ99538 433 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 ORAI3Q9BRQ5 295 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms