RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 LEPRP48357 1165 aaKnown RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 ACVR1Q04771 509 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CAMK1Q14012 370 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 GALNTL6Q49A17 601 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 MPPE1Q53F39 396 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 GPR158Q5T848 1215 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CILP2Q8IUL8 1156 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CEP97Q8IW35 865 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PPP1R14CQ8TAE6 165 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 ZNF398Q8TD17 642 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PEX13Q92968 403 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 SUDS3Q9H7L9 328 aaPredicted RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 MAN1C1Q9NR34 630 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CHD7Q9P2D1 2997 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 DNMT3BQ9UBC3 853 aaKnown RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 LHX3Q9UBR4 397 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CCL26Q9Y258 94 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 ANKRD6Q9Y2G4 727 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 RWDD3Q9Y3V2 267 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 ARHGEF15O94989 841 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 FSBPO95073 299 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 MT-CO1P00395 513 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 SLC35E2BP0CK96 405 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 CPA3P15088 417 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 PTPN2P17706 415 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 NSUN2Q08J23 767 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 SLC12A1Q13621 1099 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 C10orf67Q8IYJ2 551 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 GBP7Q8N8V2 638 aaPredicted RBP19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 GPATCH11Q8N954 259 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 DCAF4L2Q8NA75 395 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 OR13C4Q8NGS5 318 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 ELMO2Q96JJ3 720 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 DNAJC1Q96KC8 554 aaKnown RBP19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 C1QTNF1Q9BXJ1 281 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 KCNK13Q9HB14 408 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 NMRAL1Q9HBL8 299 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 ARHGAP26Q9UNA1 814 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 FCF1Q9Y324 198 aaKnown RBP19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 RAI2Q9Y5P3 530 aa19.96■□□□□ 0.79
PDLIM5-205ENST00000380180 A0A0G2JND7 137 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 GRM6O15303 877 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 DLDP09622 509 aaKnown RBP19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 STMN1P16949 149 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 EPHA5P54756 1037 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 RAB10P61026 200 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 UBE3AQ05086 875 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 ZNF460Q14592 562 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 TAF1BQ53T94 588 aaPredicted RBP19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 MPP7Q5T2T1 576 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 LDB1Q86U70 411 aaPredicted RBP19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 SH3RF2Q8TEC5 729 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 SLC12A4Q9UP95 1085 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 SPO11Q9Y5K1 396 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 C5orf67F2Z3F1 127 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 TAS2R39P59534 338 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 RHOAP61586 193 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 TEAD2Q15562 447 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 NCEH1Q6PIU2 408 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 CMTM8Q8IZV2 173 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 STYXQ8WUJ0 223 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 LRRC37BQ96QE4 947 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 OMDQ99983 421 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 THAP1Q9NVV9 213 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 MARCH4Q9P2E8 410 aaPredicted RBP19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 ACOT9Q9Y305 439 aa19.95■□□□□ 0.78
PDLIM5-205ENST00000380180 K7ERQ8 282 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 MOSPD3O75425 235 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 CRTAMO95727 393 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 EPCAMP16422 314 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 POU4F1Q01851 419 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 CCDC15Q0P6D6 951 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 RBM20Q5T481 1227 aaKnown RBP19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 RTL10Q7L3V2 364 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 LPCAT1Q8NF37 534 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 MDGA1Q8NFP4 955 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 SMIM14Q96QK8 99 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 C2orf49Q9BVC5 232 aaPredicted RBP19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 MYLK2Q9H1R3 596 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 TASP1Q9H6P5 420 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 RIMKLBQ9ULI2 386 aa19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 RUVBL2Q9Y230 463 aaKnown RBP19.94■□□□□ 0.78
PDLIM5-205ENST00000380180 G3V2L1 256 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 RPP40O75818 363 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 DCTN3O75935 186 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 S1PR4O95977 384 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 GOT2P00505 430 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 RHOP08100 348 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CRABP2P29373 138 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 MAGEA9P43362 315 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ARFIP2P53365 341 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 LMAN2Q12907 356 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 TRAF2Q12933 501 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 SETDB1Q15047 1291 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 GALNT7Q86SF2 657 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 LMNTD2Q8IXW0 634 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CENPLQ8N0S6 344 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 FIBINQ8TAL6 211 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 PDCD6IPQ8WUM4 868 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 KCTD4Q8WVF5 259 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms