RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TPST1O60507 370 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 UGT1A9O60656 530 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 RPP40O75818 363 aaKnown RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 CYP2A7P20853 494 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 INSCQ1MX18 579 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 RNF19BQ6ZMZ0 732 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ASB2Q96Q27 587 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ING2Q9H160 280 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 DCLRE1BQ9H816 532 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 UGT1A7Q9HAW7 530 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 UGT1A10Q9HAW8 530 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 UGT1A8Q9HAW9 530 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 SPATS2LQ9NUQ6 558 aaKnown RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ARL15Q9NXU5 204 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ZMYND8Q9ULU4 1186 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 MEI4A8MW99 385 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 TBL3Q12788 808 aaKnown RBP14.58□□□□□ -0.07
TCOF1-202ENST00000377797 CRY1Q16526 586 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 ADGRF1Q5T601 910 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 MILR1Q7Z6M3 343 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 SYTL1Q8IYJ3 562 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 PRPF18Q99633 342 aaKnown RBP14.58□□□□□ -0.07
TCOF1-202ENST00000377797 C17orf80Q9BSJ5 609 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 CERS4Q9HA82 394 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 CD248Q9HCU0 757 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 V9GYQ6 96 aa14.58□□□□□ -0.07
TCOF1-202ENST00000377797 WNK3Q9BYP7 1800 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 EVPLLA8MZ36 301 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 INSIG1O15503 277 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 UNC5CO95185 931 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 HLA-DQB2P05538 268 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 HAPLN1P10915 354 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 HNRNPLP14866 589 aaKnown RBP eCLIP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 MAGEA11P43364 429 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 AFF1P51825 1210 aaKnown RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 NFYCQ13952 458 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FASTKQ14296 549 aaKnown RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 UNC5BQ8IZJ1 945 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 TRPC4APQ8TEL6 797 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 DNAJC9Q8WXX5 260 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 TBC1D14Q9P2M4 693 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FETUBQ9UGM5 382 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 LNPEPQ9UIQ6 1025 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 ZMYM5Q9UJ78 669 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 ARIH1Q9Y4X5 557 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 TAF1LQ8IZX4 1826 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 UGT2B4P06133 528 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 USP4Q13107 963 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 SIX1Q15475 284 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 TSTD2Q5T7W7 516 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 TXNDC8Q6A555 127 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 DENND6AQ8IWF6 608 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 CATSPER1Q8NEC5 780 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 SEC14L1Q92503 715 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 RAP2CQ9Y3L5 183 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 A0A1W2PRU2 124 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FAM72CH0Y354 149 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 SLC2A4P14672 509 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 CDH13P55290 713 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 CAMK2GQ13555 558 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 AASDHQ4L235 1098 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FAM72AQ5TYM5 149 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FAM72DQ6L9T8 149 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 MARK2Q7KZI7 788 aaKnown RBP14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FAM72BQ86X60 149 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 FNDC5Q8NAU1 212 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 RDH11Q8TC12 318 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 ZFYVE1Q9HBF4 777 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 COPG2Q9UBF2 871 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 OPTCQ9UBM4 332 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
TCOF1-202ENST00000377797 GPX6P59796 221 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 GALNT2Q10471 571 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 TMEM259Q4ZIN3 620 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 ATP6AP1LQ52LC2 224 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 SNX30Q5VWJ9 437 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 DET1Q7L5Y6 550 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 TRAPPC5Q8IUR0 188 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 STYXQ8WUJ0 223 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 DNAJC1Q96KC8 554 aaKnown RBP14.57□□□□□ -0.08
TCOF1-202ENST00000377797 SLC28A3Q9HAS3 691 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 GNPTGQ9UJJ9 305 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 TEX264Q9Y6I9 313 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 ABLIM1O14639 778 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 ZBTB14O43829 449 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 FSBPO95073 299 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 IL1BP01584 269 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 EML3Q32P44 896 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 HECTD2Q5U5R9 776 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 KIAA0408Q6ZU52 694 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 MRPL10Q7Z7H8 261 aaKnown RBP14.57□□□□□ -0.08
TCOF1-202ENST00000377797 RNF148Q8N7C7 305 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 SLC2A13Q96QE2 648 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 YY1AP1Q9H869 796 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 PNPOQ9NVS9 261 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 POLG2Q9UHN1 485 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 FCF1Q9Y324 198 aaKnown RBP14.57□□□□□ -0.08
TCOF1-202ENST00000377797 PROCP04070 461 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 DDX5P17844 614 aaKnown RBP14.57□□□□□ -0.08
TCOF1-202ENST00000377797 SH3BGRP55822 239 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms