RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PGGT1BP53609 377 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 DEFA1P59665 94 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 DEFA3P59666 94 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 PDSS2Q86YH6 399 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 DENND1CQ8IV53 801 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 TMEM132CQ8N3T6 1108 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 SERPINB11Q96P15 392 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 COQ10BQ9H8M1 238 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 ACTR8Q9H981 624 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 ABCC13Q9NSE7 274 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 TAS2R1Q9NYW7 299 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.365e-7■■■□□ 16.5
SMC1A-202ENST00000375340 KLQ9UEF7 1012 aa6.58□□□□□ -1.36
SMC1A-202ENST00000375340 LRP5O75197 1615 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 C9IYK1 514 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 RAD51BO15315 384 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DNAJA2O60884 412 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CYBBP04839 570 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MAPK1P28482 360 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 GRK4P32298 578 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 WNT7BP56706 349 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 GJA9P57773 515 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 BROXQ5VW32 411 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DRICH1Q6PGQ1 229 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF554Q86TJ5 538 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DHX33Q9H6R0 707 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 OAS1P00973 400 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 C2P06681 752 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MTHFD1P11586 935 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 GNAZP19086 355 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 WEE1P30291 646 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 GRM5P41594 1212 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 FSCN1Q16658 493 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SOWAHAQ2M3V2 549 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 C9orf131Q5VYM1 1079 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 OR2T34Q8NGX1 318 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 OR2T3Q8NH03 318 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DGCR14Q96DF8 476 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 OR52B2Q96RD2 323 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 HAPLN2Q9GZV7 340 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TRAF6Q9Y4K3 522 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MYH14Q7Z406 1995 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 KPNA4O00629 521 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 AP2A1O95782 977 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 OR4Q2P0C623 313 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 JAK1P23458 1154 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ADSLP30566 484 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MTHFRP42898 656 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CLCN5P51795 746 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PLD1Q13393 1074 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 POM121L1PQ3SYA9 428 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MBLAC2Q68D91 279 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CGB2Q6NT52 195 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 FRMD7Q6ZUT3 714 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF513Q8N8E2 541 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TWIST2Q8WVJ9 160 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 LZICQ8WZA0 190 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SNX27Q96L92 541 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 EPB41L4BQ9H329 900 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ASNA1O43681 348 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DNAJB2P25686 324 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 XIAPP98170 497 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MAP3K10Q02779 954 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 IL23RQ5VWK5 629 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 GIPC3Q8TF64 312 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 LPGAT1Q92604 370 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 RBMX2Q9Y388 322 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CST1P01037 141 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ITGALP20701 1170 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MRPS6P82932 125 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 LINGO1Q96FE5 620 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 UGT2B28Q9BY64 529 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ARMC7Q9H6L4 198 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 UBA2Q9UBT2 640 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TIMM22Q9Y584 194 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SMIM31A0A1B0GVY4 71 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 G3V2T6 193 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 AZIN1O14977 448 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SERPINF2P08697 491 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 USP46P62068 366 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DSC2Q02487 901 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SPESP1Q6UW49 350 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CTU1Q7Z7A3 348 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PPTC7Q8NI37 304 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 RAET1EQ8TD07 263 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 OXCT2Q9BYC2 517 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PARVBQ9HBI1 364 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TRNAU1APQ9NX07 287 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 RAD54BQ9Y620 910 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 KIF13BQ9NQT8 1826 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 KANSL1LA0AUZ9 987 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 AXLP30530 894 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 NNMTP40261 264 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 THOP1P52888 689 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF621Q6ZSS3 439 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PGAM4Q8N0Y7 254 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PSMA8Q8TAA3 256 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms