RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 SERINC3Q13530 473 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 FUT10Q6P4F1 479 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 RP9Q8TA86 221 aaKnown RBP20.71■□□□□ 0.91
VEGFA-204ENST00000372064 GIPC2Q8TF65 315 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 POMKQ9H5K3 350 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 CD1EP15812 388 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 MRPS35P82673 323 aaKnown RBP20.71■□□□□ 0.91
VEGFA-204ENST00000372064 NADSYN1Q6IA69 706 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 IRGCQ6NXR0 463 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 TMEM173Q86WV6 379 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-204ENST00000372064 TSPAN17Q96FV3 270 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 UBXN10Q96LJ8 280 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 COMMD8Q9NX08 183 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 ARVCFO00192 962 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 WISP3O95389 354 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-204ENST00000372064 KLC1Q07866 573 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 NOGQ13253 232 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 CSHL1Q14406 222 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 TRIM67Q6ZTA4 783 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 PTAR1Q7Z6K3 402 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-204ENST00000372064 CCNYL1Q8N7R7 359 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 SPPL2BQ8TCT7 592 aa20.71■□□□□ 0.91
VEGFA-204ENST00000372064 GREB1Q4ZG55 1949 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 OR1E1P30953 314 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 HERC3Q15034 1050 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 AGAP9Q5VTM2 703 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 SETD3Q86TU7 594 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-204ENST00000372064 HPS6Q86YV9 775 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 CCDC126Q96EE4 140 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 TTC1Q99614 292 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 ELAC1Q9H777 363 aaKnown RBP20.7■□□□□ 0.9
VEGFA-204ENST00000372064 BUD23O43709 281 aaKnown RBP20.7■□□□□ 0.9
VEGFA-204ENST00000372064 TLR5O60602 858 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 LTA4HP09960 611 aaKnown RBP20.7■□□□□ 0.9
VEGFA-204ENST00000372064 HOXD10P28358 340 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 MAPKAPK2P49137 400 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 ARSDP51689 593 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 LBRQ14739 615 aaKnown RBP20.7■□□□□ 0.9
VEGFA-204ENST00000372064 HECTD2Q5U5R9 776 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 TAS1R1Q7RTX1 841 aa20.7■□□□□ 0.9
VEGFA-204ENST00000372064 LDB1Q86U70 411 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-204ENST00000372064 LDB2O43679 373 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 INHAP05111 366 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 PDHA1P08559 390 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 ZDHHC11BP0C7U3 371 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 KCNQ1P51787 676 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 YBEYP58557 167 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-204ENST00000372064 ACVR1Q04771 509 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 SNX32Q86XE0 403 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 PRPF19Q9UMS4 504 aaKnown RBP20.69■□□□□ 0.9
VEGFA-204ENST00000372064 KCTD3Q9Y597 815 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 NEMP2A6NFY4 417 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 TBC1D4O60343 1298 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 ACAP2Q15057 778 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 PPM1LQ5SGD2 360 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 RNF135Q8IUD6 432 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 SEMA3CQ99985 751 aa20.69■□□□□ 0.9
VEGFA-204ENST00000372064 G3BP2Q9UN86 482 aaKnown RBP20.69■□□□□ 0.9
VEGFA-204ENST00000372064 TRPC5OSA6NMA1 111 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 MUSKO15146 869 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 PRAMEF11O60813 436 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 S1PR4O95977 384 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 BTG3Q14201 252 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-204ENST00000372064 TCTN1Q2MV58 587 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 CFAP52Q8N1V2 620 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 OR6P1Q8NGX9 317 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 PYDC1Q8WXC3 89 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 HDAC10Q969S8 669 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 ZBTB26Q9HCK0 441 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 VWA7Q9Y334 891 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 TET1Q8NFU7 2136 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 OR51F1A6NGY5 319 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 A8MT66 165 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 TMEM233B4DJY2 109 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 BAG2O95816 211 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 RBP1P09455 135 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 SLC26A3P40879 764 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 SATB1Q01826 763 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 MTA1Q13330 715 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 CYLC2Q14093 348 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-204ENST00000372064 PDCD2Q16342 344 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-204ENST00000372064 SH2D4BQ5SQS7 431 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 TMEM198Q66K66 360 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 KLC3Q6P597 504 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 PRSS55Q6UWB4 352 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-204ENST00000372064 C16orf89Q6UX73 402 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 RNF111Q6ZNA4 994 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 DHDDSQ86SQ9 333 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 PEX13Q92968 403 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 CCDC124Q96CT7 223 aaKnown RBP20.68■□□□□ 0.9
VEGFA-204ENST00000372064 POLR1EQ9GZS1 481 aaKnown RBP20.68■□□□□ 0.9
VEGFA-204ENST00000372064 PDFQ9HBH1 243 aa20.68■□□□□ 0.9
VEGFA-204ENST00000372064 IPO13O94829 963 aaKnown RBP20.67■□□□□ 0.9
VEGFA-204ENST00000372064 CCDC166P0CW27 439 aa20.67■□□□□ 0.9
VEGFA-204ENST00000372064 TACR2P21452 398 aa20.67■□□□□ 0.9
VEGFA-204ENST00000372064 KCNA5P22460 613 aa20.67■□□□□ 0.9
VEGFA-204ENST00000372064 KYQ8NBH2 561 aa20.67■□□□□ 0.9
VEGFA-204ENST00000372064 MICAL1Q8TDZ2 1067 aa20.67■□□□□ 0.9
VEGFA-204ENST00000372064 CATSPER2Q96P56 530 aa20.67■□□□□ 0.9
VEGFA-204ENST00000372064 VPS28Q9UK41 221 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms