RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 BICDL2A1A5D9 508 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 CDHR4A6H8M9 788 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 LRRIQ3A6PVS8 624 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 CYB561D2O14569 222 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 PRRG1O14668 218 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 CETN3O15182 167 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 CCL16O15467 120 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 LETM1O95202 739 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 SEC24AO95486 1093 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 ITGB3P05106 788 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 CCDC192P0DO97 292 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 PTPN2P17706 415 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 SP100P23497 879 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 PSMC2P35998 433 aaKnown RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 BUD31P41223 144 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 TFAMQ00059 246 aaKnown RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 TDGQ13569 410 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 HTR4Q13639 388 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 IQCB1Q15051 598 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 LONRF1Q17RB8 773 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 C1QL3Q5VWW1 255 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 LMBRD2Q68DH5 695 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 DSTYKQ6XUX3 929 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 MED25Q71SY5 747 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 GRASPQ7Z6J2 395 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 PDSS2Q86YH6 399 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 FAM186BQ8IYM0 893 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 TMEM86AQ8N2M4 240 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 ZNF808Q8N4W9 903 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 CSGALNACT2Q8N6G5 542 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 FITM2Q8N6M3 262 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 LEMD2Q8NC56 503 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 OR10T2Q8NGX3 314 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 Q8TCH9 128 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 NOC3LQ8WTT2 800 aaKnown RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 C2orf15Q8WU43 125 aaKnown RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 MTMR12Q9C0I1 747 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 ZCWPW1Q9H0M4 648 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 KLHL11Q9NVR0 708 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 GDE1Q9NZC3 331 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 DNMT3BQ9UBC3 853 aaKnown RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 CDH7Q9ULB5 785 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 DUSP12Q9UNI6 340 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 PTPRZ1P23471 2315 aaPredicted RBP8.19□□□□□ -1.1
YBX3-204ENST00000366290 PTPRDP23468 1912 aa8.19□□□□□ -1.1
YBX3-204ENST00000366290 MTMR11A4FU01 709 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 DRGXA6NNA5 263 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 ISM1B1AKI9 464 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 SLC16A3O15427 465 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 AGFG2O95081 481 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 RHOP08100 348 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 FAM163BP0C2L3 166 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 TRIM49P0CI25 452 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 TRIM49CP0CI26 452 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 EPB41P11171 864 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 BRAFP15056 766 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 ELF1P32519 619 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 PIK3CBP42338 1070 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 KCNJ5P48544 419 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 VAMP7P51809 220 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 PSMC1P62191 440 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 RBP5P82980 135 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 ENPEPQ07075 957 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 BFSP1Q12934 665 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 PLD1Q13393 1074 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 WSCD1Q658N2 575 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 Q6ZSN1 163 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 METTL23Q86XA0 190 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 SYT12Q8IV01 421 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 DHX40Q8IX18 779 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 GSPT2Q8IYD1 628 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 TBC1D15Q8TC07 691 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 KBTBD7Q8WVZ9 684 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 FGF13Q92913 245 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 CCDC127Q96BQ5 260 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 TBCBQ99426 244 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 ELAC2Q9BQ52 826 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 BPIFA3Q9BQP9 254 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 TRIM54Q9BYV2 358 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 CYP4F11Q9HBI6 524 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 SAMSN1Q9NSI8 373 aaKnown RBP8.18□□□□□ -1.1
YBX3-204ENST00000366290 HCFC1R1Q9NWW0 138 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 CEP72Q9P209 647 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 AGAP1Q9UPQ3 857 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 FRMD4BQ9Y2L6 1034 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 MED16Q9Y2X0 877 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 NFE2L3Q9Y4A8 694 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
YBX3-204ENST00000366290 ZNF292O60281 2723 aa8.18□□□□□ -1.1
YBX3-204ENST00000366290 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ZNF197O14709 1029 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 VNN1O95497 513 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 TNNC2P02585 160 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 OR4Q2P0C623 313 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 TMEM191BP0C7N4 346 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 DLATP10515 647 aaKnown RBP8.17□□□□□ -1.1
YBX3-204ENST00000366290 ZNF18P17022 549 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 LHX1P48742 406 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms