RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IPPQ9Y573 584 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NR2E3Q9Y5X4 410 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 MAD1L1Q9Y6D9 718 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SF3B1O75533 1304 aaKnown RBP eCLIP7.44□□□□□ -1.229e-6■■■■■ 68.9
CLCN3-202ENST00000360642 CAPN14A8MX76 684 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 BPGMP07738 259 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 HALP42357 657 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TAF6P49848 677 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LILRA4P59901 499 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SARNPP82979 210 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SNX17Q15036 470 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 MROH9Q5TGP6 573 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ATG16L1Q676U5 607 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CXorf57Q6NSI4 855 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LILRA6Q6PI73 481 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 C4orf50Q6ZRC1 276 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 DENND5BQ6ZUT9 1274 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 PAQR9Q6ZVX9 377 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ANKRD23Q86SG2 305 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 FAM131BQ86XD5 332 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 COLGALT1Q8NBJ5 622 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 BRI3BPQ8WY22 251 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NDRG1Q92597 394 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 RSRC1Q96IZ7 334 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ANKRD27Q96NW4 1050 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NPY6RQ99463 290 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LGMNQ99538 433 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CRB3Q9BUF7 120 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TRIM6Q9C030 488 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 C20orf27Q9GZN8 174 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SNX25Q9H3E2 840 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TSC2P49815 1807 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 WDR27A2RRH5 827 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SDR42E2A6NKP2 422 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 MFSD11O43934 449 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 DAB1O75553 588 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 BEST1O76090 585 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CYP2C9P11712 490 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NEFHP12036 1026 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ARL4AP40617 200 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 GTF2A2P52657 109 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SLC8A3P57103 927 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 PITX1P78337 314 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TTC7BQ86TV6 843 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 UNC5BQ8IZJ1 945 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NDUFAF2Q8N183 169 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 B3GALNT2Q8NCR0 500 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CFAP61Q8NHU2 1237 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 DPF3Q92784 378 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 RELTQ969Z4 430 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 P2RY11Q96G91 374 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TNIP3Q96KP6 325 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 APOL6Q9BWW8 343 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 GOLGA2P5Q9HBQ8 144 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 DMRT3Q9NQL9 472 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 VPS45Q9NRW7 570 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LRRC42Q9Y546 428 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NPFFR2Q9Y5X5 522 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CCL15-CCL14A0A0B4J2E2 113 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 E2F8A0AVK6 867 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 HAS3O00219 553 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 FCHO1O14526 889 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 OPHN1O60890 802 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ENTPD5O75356 428 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 SYPP08247 313 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 FAM163BP0C2L3 166 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 SULT1E1P49888 294 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ADIGQ0VDE8 80 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 WASHC5Q12768 1159 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 DPYSQ14117 519 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 PAFAH1B3Q15102 231 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 CHI3L2Q15782 390 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 SMAD1Q15797 465 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 CCL15Q16663 113 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 RFWD3Q6PCD5 774 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 KYAT3Q6YP21 454 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 RINLQ6ZS11 566 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 NUDCD3Q8IVD9 361 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 KCT2Q8NC54 265 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 NETO2Q8NC67 525 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ARRDC4Q8NCT1 418 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 SMG8Q8ND04 991 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 STKLD1Q8NE28 680 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ACMSDQ8TDX5 336 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 DIS3LQ8TF46 1054 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 FBXO41Q8TF61 875 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 DEPDC1BQ8WUY9 529 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 DNAJB3Q8WWF6 145 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 NMUR2Q9GZQ4 415 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 PCMTD2Q9NV79 361 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 TAS2R1Q9NYW7 299 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 TCFL5Q9UL49 500 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 PIN4Q9Y237 131 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 C7orf72A4D263 438 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 I3L4J1 428 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 OIP5O43482 229 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ALDOAP04075 364 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 RARBP10826 455 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 LRPAP1P30533 357 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ADMP35318 185 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms