RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CLCA4Q14CN2 919 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 AGERQ15109 404 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 TCEA2Q15560 299 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
VPS29-201ENST00000360579 WSCD2Q2TBF2 565 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 INO80DQ53TQ3 878 aaPredicted RBP13.97□□□□□ -0.17
VPS29-201ENST00000360579 ATXN7L2Q5T6C5 722 aaPredicted RBP13.97□□□□□ -0.17
VPS29-201ENST00000360579 PHF19Q5T6S3 580 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 MANEALQ5VSG8 457 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 OGFOD3Q6PK18 319 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 TAF8Q7Z7C8 310 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 NLRP14Q86W24 1093 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 SLITRK4Q8IW52 837 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 HTR3CQ8WXA8 447 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 CFAP57Q96MR6 1250 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 NDFIP2Q9NV92 336 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 LRIT1Q9P2V4 623 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 DNAI1Q9UI46 699 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 TUBD1Q9UJT1 453 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 DNAJC12Q9UKB3 198 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 DOPEY2Q9Y3R5 2298 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 FOXN3O00409 490 aaPredicted RBP13.96□□□□□ -0.17
VPS29-201ENST00000360579 BUB1O43683 1085 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 KDELR3O43731 214 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 TMCC1O94876 653 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 LSM8O95777 96 aaKnown RBP13.96□□□□□ -0.17
VPS29-201ENST00000360579 KELP23276 732 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 PON1P27169 355 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 ADRA1BP35368 520 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 ETV5P41161 510 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 RHOAP61586 193 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 APBA1Q02410 837 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 MTM1Q13496 603 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 GRM3Q14832 879 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 MAP9Q49MG5 647 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 C14orf28Q4W4Y0 310 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 ERAP2Q6P179 960 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 PIM3Q86V86 326 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 ZNF354CQ86Y25 554 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 IRF2BP1Q8IU81 584 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 FAM71AQ8IYT1 594 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 FAM46DQ8NEK8 389 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 GPBAR1Q8TDU6 330 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 TMEM59LQ9UK28 342 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 OR1A2Q9Y585 309 aa13.96□□□□□ -0.17
VPS29-201ENST00000360579 DOCK4Q8N1I0 1966 aa13.96□□□□□ -0.18
VPS29-201ENST00000360579 TEX15Q9BXT5 2789 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 GOLGA8SH3BPF8 625 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 CACNB4O00305 520 aaPredicted RBP13.95□□□□□ -0.18
VPS29-201ENST00000360579 HGSO14964 777 aaPredicted RBP13.95□□□□□ -0.18
VPS29-201ENST00000360579 CPNE6O95741 557 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 WT1P19544 449 aaPredicted RBP13.95□□□□□ -0.18
VPS29-201ENST00000360579 ITIH2P19823 946 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 KCNAB2Q13303 367 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS29-201ENST00000360579 LEKR1Q6ZMV7 388 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 CCDC112Q8NEF3 446 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 OR56A4Q8NGH8 313 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 KIAA1524Q8TCG1 905 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 TBC1D31Q96DN5 1066 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 HMCESQ96FZ2 354 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 PDXPQ96GD0 296 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 NCAPGQ9BPX3 1015 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 SLC12A9Q9BXP2 914 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 DPEP2Q9H4A9 486 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 COQ6Q9Y2Z9 468 aa13.95□□□□□ -0.18
VPS29-201ENST00000360579 NBPF19A0A087WUL8 3843 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 TSPAN11A1L157 253 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 CFAP69A5D8W1 941 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 AGRPO00253 132 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 BIN1O00499 593 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 TNFRSF10CO14798 259 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 LRIG2O94898 1065 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 PCCBP05166 539 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 CYP11B1P15538 503 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 CASRP41180 1078 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 CCR10P46092 362 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 POLE2P56282 527 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 KIAA1024LP59773 190 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 ATP11AP98196 1134 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 SERINC3Q13530 473 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 C16orf72Q14CZ0 275 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 UGP2Q16851 508 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
VPS29-201ENST00000360579 CFAP58Q5T655 872 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 TRNP1Q6NT89 227 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 BRAT1Q6PJG6 821 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 IL22RA1Q8N6P7 574 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 CATSPER2Q96P56 530 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 TAAR9Q96RI9 348 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 CDH19Q9H159 772 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 EPN3Q9H201 632 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 SEMA6CQ9H3T2 930 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 PCDH12Q9NPG4 1184 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 DAAM1Q9Y4D1 1078 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 PCDHGA3Q9Y5H0 932 aa13.94□□□□□ -0.18
VPS29-201ENST00000360579 SCN8AQ9UQD0 1980 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 B4DGG1 531 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms