RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FERD3LQ96RJ6 166 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 CDADC1Q9BWV3 514 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 PSMD13Q9UNM6 376 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 TBC1D30Q9Y2I9 924 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 HBS1LQ9Y450 684 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ZMYM2Q9UBW7 1377 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 HECW2Q9P2P5 1572 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 H3BRB1 525 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 RTN3O95197 1032 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 BST1Q10588 318 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 OAS3Q9Y6K5 1087 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 A0A087X0B3 334 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 RAB2AP61019 212 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ESRP1Q6NXG1 681 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 TRIM40Q6P9F5 258 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 GPRIN3Q6ZVF9 776 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 LZTR1Q8N653 840 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 OR12D3Q9UGF7 316 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 LIASO43766 372 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 MLYCDO95822 493 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 CTBP1Q13363 440 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ZFP69Q49AA0 526 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ZC3H12AQ5D1E8 599 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.1■□□□□ 0.171e-7■■■■□ 25.3
COL18A1-203ENST00000359759 CDC42BPBQ9Y5S2 1711 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 RAB10P61026 200 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 USP4Q13107 963 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 PLA2G4EQ3MJ16 856 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ERICH5Q6P6B1 374 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 UBE2J2Q8N2K1 259 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 GSTCDQ8NEC7 633 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 C1GALT1C1Q96EU7 318 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 DUSP9Q99956 384 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 TM6SF2Q9BZW4 377 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 C12orf4Q9NQ89 552 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 CCNKO75909 580 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 NR4A1P22736 598 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 AQP1P29972 269 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 MAXP61244 160 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 PPM1LQ5SGD2 360 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 MCFD2Q8NI22 146 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SYTL5Q8TDW5 730 aaPredicted RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 CSGALNACT1Q8TDX6 532 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SPATA5L1Q9BVQ7 753 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 FAIM2Q9BWQ8 316 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ABCC3O15438 1527 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 A0A075B6Q4 140 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 RFXANKO14593 260 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 PPIL2Q13356 520 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 CORO2BQ9UQ03 480 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 IRAK3Q9Y616 596 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 TRUB2O95900 331 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 TOP3BO95985 862 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 POLR2LP62875 67 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 HKDC1Q2TB90 917 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SPDYCQ5MJ68 293 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 DENND1CQ8IV53 801 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ALLCQ8N6M5 410 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ITCHQ96J02 903 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 INTS7Q9NVH2 962 aaKnown RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ADGRE2Q9UHX3 823 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF221Q9UK13 617 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 GMEB1Q9Y692 573 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 TRPM1Q7Z4N2 1603 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 A0A0A0MRY4 1105 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ULK1O75385 1050 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SLITRK3O94933 977 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 ACADLP28330 430 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 MTHFRP42898 656 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 MAMLD1Q13495 774 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 C2orf73Q8N5S3 287 aaPredicted RBP16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 EQTNQ9NQ60 294 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 C8orf4Q9NR00 106 aa16.1■□□□□ 0.17
COL18A1-203ENST00000359759 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 EGFLAMQ63HQ2 1017 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 METTL7BQ6UX53 244 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 RGL4Q8IZJ4 473 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CLIP4Q8N3C7 705 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF433Q8N7K0 673 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 OR10G6Q8NH81 332 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 PTCD2Q8WV60 388 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 PHF12Q96QT6 1004 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CATP04040 527 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 SERPINA6P08185 405 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CLK3P49761 638 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CPSF6Q16630 551 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 SLC27A1Q6PCB7 646 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 SPPL2CQ8IUH8 684 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ZFP28Q8NHY6 868 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 RP9Q8TA86 221 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 DPF3Q92784 378 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 SIPA1Q96FS4 1042 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 PPP3R2Q96LZ3 170 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms