RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 LBHD1Q9BQE6 289 aaPredicted RBP25.84■■□□□ 1.73
CLK2-201ENST00000355560 TRIM55Q9BYV6 548 aa25.84■■□□□ 1.73
CLK2-201ENST00000355560 COPG2Q9UBF2 871 aa25.84■■□□□ 1.73
CLK2-201ENST00000355560 HGSO14964 777 aaPredicted RBP25.83■■□□□ 1.73
CLK2-201ENST00000355560 PRLP01236 227 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 PDHA1P08559 390 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 ACVR1Q04771 509 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 PTPRCAPQ14761 206 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 LACTB2Q53H82 288 aaPredicted RBP25.83■■□□□ 1.73
CLK2-201ENST00000355560 CNSTQ6PJW8 725 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 CILP2Q8IUL8 1156 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 PPP1R14CQ8TAE6 165 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 TBATAQ96M53 351 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 DCTN4Q9UJW0 460 aa25.83■■□□□ 1.73
CLK2-201ENST00000355560 OR51F1A6NGY5 319 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 MOSPD3O75425 235 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 MT-CO1P00395 513 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 SLC35E2BP0CK96 405 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 POLD2P49005 469 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 NSUN2Q08J23 767 aaKnown RBP eCLIP25.82■■□□□ 1.72
CLK2-201ENST00000355560 SLC5A9Q2M3M2 681 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 ZNF789Q5FWF6 425 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 MBLAC2Q68D91 279 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 FITM2Q8N6M3 262 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 LPCAT1Q8NF37 534 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 OR13C4Q8NGS5 318 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 ELMO2Q96JJ3 720 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 C7orf26Q96N11 449 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 ANKRD6Q9Y2G4 727 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 TGDSO95455 350 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 STMN1P16949 149 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 DDX6P26196 483 aaKnown RBP eCLIP25.82■■□□□ 1.729e-7■■■□□ 16.3
CLK2-201ENST00000355560 LEPRP48357 1165 aaKnown RBP25.82■■□□□ 1.72
CLK2-201ENST00000355560 RAB10P61026 200 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 LMAN2Q12907 356 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 ARHGAP15Q53QZ3 475 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 TNS4Q8IZW8 715 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 RFWD2Q8NHY2 731 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 PDCD6IPQ8WUM4 868 aaKnown RBP25.82■■□□□ 1.72
CLK2-201ENST00000355560 SUDS3Q9H7L9 328 aaPredicted RBP25.82■■□□□ 1.72
CLK2-201ENST00000355560 SPO11Q9Y5K1 396 aa25.82■■□□□ 1.72
CLK2-201ENST00000355560 GRXCR1A8MXD5 290 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 CLASP2O75122 1294 aaKnown RBP25.81■■□□□ 1.72
CLK2-201ENST00000355560 HOXA9P31269 272 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 OCRLQ01968 901 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 TRAF2Q12933 501 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 SLC12A1Q13621 1099 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 ZNF460Q14592 562 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 RETSATQ6NUM9 610 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 NCEH1Q6PIU2 408 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 C10orf107Q8IVU9 208 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 CEP97Q8IW35 865 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 PNPLA1Q8N8W4 532 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 RIN3Q8TB24 985 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 TASP1Q9H6P5 420 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 K7ERQ8 282 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 CRTAMO95727 393 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 CYBBP04839 570 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 FGF3P11487 239 aaPredicted RBP25.81■■□□□ 1.72
CLK2-201ENST00000355560 LIG3P49916 1009 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 STX3Q13277 289 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 ATXN7L2Q5T6C5 722 aaPredicted RBP25.81■■□□□ 1.72
CLK2-201ENST00000355560 GLT6D1Q7Z4J2 308 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 FIBINQ8TAL6 211 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 ZNF398Q8TD17 642 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 STYXQ8WUJ0 223 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 ACDQ96AP0 544 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 ADGRE3Q9BY15 652 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 ZNF395Q9H8N7 513 aaPredicted RBP25.81■■□□□ 1.72
CLK2-201ENST00000355560 NMRAL1Q9HBL8 299 aa25.81■■□□□ 1.72
CLK2-201ENST00000355560 KIAA1522Q9P206 1035 aaPredicted RBP25.81■■□□□ 1.72
CLK2-201ENST00000355560 MARCH4Q9P2E8 410 aaPredicted RBP25.81■■□□□ 1.72
CLK2-201ENST00000355560 A0A0G2JND7 137 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 SNNO75324 88 aaPredicted RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 RPP40O75818 363 aaKnown RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 UBOX5O94941 541 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 GOT2P00505 430 aaKnown RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 RB1P06400 928 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 CA3P07451 260 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 CD70P32970 193 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 RBM20Q5T481 1227 aaKnown RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 FAM109BQ6ICB4 259 aaPredicted RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 LDB1Q86U70 411 aaPredicted RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 LMNTD2Q8IXW0 634 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 GBP7Q8N8V2 638 aaPredicted RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 USP13Q92995 863 aaPredicted RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 TSNARE1Q96NA8 513 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 NDNQ99608 321 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 C1QTNF1Q9BXJ1 281 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 TM6SF2Q9BZW4 377 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 ACTR5Q9H9F9 607 aaPredicted RBP25.8■■□□□ 1.72
CLK2-201ENST00000355560 RIMKLBQ9ULI2 386 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 CDH23Q9H251 3354 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 NOTCH4Q99466 2003 aa25.8■■□□□ 1.72
CLK2-201ENST00000355560 CHD9Q3L8U1 2897 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 PER2O15055 1255 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 XYLBO75191 536 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 CPA3P15088 417 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 TAS2R39P59534 338 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 ZNF697Q5TEC3 545 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms