RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 LMNAP02545 664 aaKnown RBP13.99□□□□□ -0.17
TRIM4-201ENST00000349062 SLC35E2BP0CK96 405 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 ITGB6P18564 788 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 GSTT1P30711 240 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 ALDH1A3P47895 512 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 DLG1Q12959 904 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 FAM26DQ5JW98 314 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 PPM1LQ5SGD2 360 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 TXNDC8Q6A555 127 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 IRGCQ6NXR0 463 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 SORT1Q99523 831 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 OLFM1Q99784 485 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 SIN3BO75182 1162 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 RPLP2P05387 115 aaKnown RBP13.99□□□□□ -0.17
TRIM4-201ENST00000349062 CTPS1P17812 591 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 RAB10P61026 200 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 ASPHQ12797 758 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 TRIP4Q15650 581 aaPredicted RBP13.99□□□□□ -0.17
TRIM4-201ENST00000349062 LAYNQ6UX15 382 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 MFN1Q8IWA4 741 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 GALNT15Q8N3T1 639 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 FUBP3Q96I24 572 aaKnown RBP eCLIP13.99□□□□□ -0.176e-6■□□□□ 8.1
TRIM4-201ENST00000349062 CINPQ9BW66 212 aaPredicted RBP13.99□□□□□ -0.17
TRIM4-201ENST00000349062 TMEM39AQ9NV64 488 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRIM4-201ENST00000349062 DOCK6Q96HP0 2047 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 H0Y626 953 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 COCHO43405 550 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 CIB2O75838 187 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 RHOCP08134 193 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 CCNG1P51959 295 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 BTG3Q14201 252 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SH2D4BQ5SQS7 431 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 ANKS3Q6ZW76 656 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 ARL14EPQ8N8R7 260 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SPPL2BQ8TCT7 592 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 KIFC1Q9BW19 673 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 OR6C75A6NL08 312 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SUPT7LO94864 414 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 RTN3O95197 1032 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 CDKN1CP49918 316 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SMAD3P84022 425 aaKnown RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SLC12A1Q13621 1099 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 ATXN7L2Q5T6C5 722 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 RNF219Q5W0B1 726 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 LRRC8EQ6NSJ5 796 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 ARHGAP18Q8N392 663 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 USP13Q92995 863 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 SLC39A13Q96H72 371 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 BEGAINQ9BUH8 593 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 ILKAPQ9H0C8 392 aaPredicted RBP13.98□□□□□ -0.17
TRIM4-201ENST00000349062 TLR9Q9NR96 1032 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 FAM8A1Q9UBU6 413 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 ZDHHC2Q9UIJ5 367 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
TRIM4-201ENST00000349062 KLHL33A6NCF5 533 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 LRRC14BA6NHZ5 514 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 G3V2L1 256 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 BIRC5O15392 142 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 DLX3O60479 287 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 KLKB1P03952 638 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 CKMP06732 381 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 KCNA5P22460 613 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 FMO4P31512 558 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 SLC11A2P49281 568 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 OXCT1P55809 520 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 FAM189BP81408 668 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 HNRNPDQ14103 355 aaKnown RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 LRRC23Q53EV4 343 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 RANBP10Q6VN20 620 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 TIFABQ6ZNK6 161 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 CENPLQ8N0S6 344 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 ACMSDQ8TDX5 336 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 TLE6Q9H808 572 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 TRPM5Q9NZQ8 1165 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 SNNO75324 88 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 DEFB103AP81534 67 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 CYP4F8P98187 520 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 ZNF177Q13360 481 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 USP41Q3LFD5 358 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 HABP4Q5JVS0 413 aaKnown RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 HECTD3Q5T447 861 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 MANEALQ5VSG8 457 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 TAS2R42Q7RTR8 314 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 KBTBD2Q8IY47 623 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 ANKRD49Q8WVL7 239 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 TSGA13Q96PP4 275 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 POLR1EQ9GZS1 481 aaKnown RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 VPS28Q9UK41 221 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 FCF1Q9Y324 198 aaKnown RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 HEATR9A2RTY3 570 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 MAGEA13PA6NCF6 341 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 MPOP05164 745 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 ENO3P13929 434 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 CDK18Q07002 472 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms