RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 EIF3CLB5ME19 914 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 PRAMEF11O60813 436 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 USP12O75317 370 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 MYBL1P10243 752 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 ERCC2P18074 760 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 ELP6Q0PNE2 266 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 KLHL40Q2TBA0 621 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 ESRP1Q6NXG1 681 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 RBM44Q6ZP01 1051 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 RFX8Q6ZV50 586 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 ZNF605Q86T29 641 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 FSTL5Q8N475 847 aaPredicted RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 ARFGAP1Q8N6T3 406 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 KCNE4Q8WWG9 221 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 HSPH1Q92598 858 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 KLF6Q99612 283 aaPredicted RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 EIF3CQ99613 913 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 CPEB1Q9BZB8 566 aaKnown RBP12.53□□□□□ -0.4
SGCA-202ENST00000344627 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 LRRK1Q38SD2 2015 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 IGSF10Q6WRI0 2623 aa12.53□□□□□ -0.4
SGCA-202ENST00000344627 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 LMO7DNF2Z398 122 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 H3BRJ5 948 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 AREL1O15033 823 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 SPINT1O43278 529 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 ALPIP09923 528 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 IGFALSP35858 605 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 ARL4AP40617 200 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 CXADRP78310 365 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 DEFB133Q30KQ1 61 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 MACC1Q6ZN28 852 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 SRLQ86TD4 932 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
SGCA-202ENST00000344627 FNIP1Q8TF40 1166 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 FUCA2Q9BTY2 467 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 BOCQ9BWV1 1114 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 SLC13A1Q9BZW2 595 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 ATP13A3Q9H7F0 1226 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
SGCA-202ENST00000344627 KLF15Q9UIH9 416 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 DOLKQ9UPQ8 538 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.41
SGCA-202ENST00000344627 BZW2Q9Y6E2 419 aaKnown RBP12.52□□□□□ -0.41
SGCA-202ENST00000344627 LY6G6EA0A0G2JKS1 128 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 LRCH4O75427 683 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 PRKCGP05129 697 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ANXA6P08133 673 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 AMPD1P23109 780 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 HTR1BP28222 390 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 SERPINA4P29622 427 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 SCNN1BP51168 640 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 CFHR1Q03591 330 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 BCL2L1Q07817 233 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 C1orf61Q13536 156 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 LRRC14Q15048 493 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 IRF4Q15306 451 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ELOCQ15369 112 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 TCEA2Q15560 299 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 UGP2Q16851 508 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 TMEM52BQ4KMG9 183 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 TAF1BQ53T94 588 aaPredicted RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 PRRT3Q5FWE3 981 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 FIGNQ5HY92 759 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 TPRG1LQ5T0D9 272 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 EFL1Q7Z2Z2 1120 aaKnown RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 ARHGAP12Q8IWW6 846 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 WDR36Q8NI36 951 aaKnown RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 CRELD1Q96HD1 420 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 BTBD6Q96KE9 485 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ZNF641Q96N77 438 aaPredicted RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 SLC46A1Q96NT5 459 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ISCUQ9H1K1 167 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 PDFQ9HBH1 243 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ASCL3Q9NQ33 180 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 APOBEC3BQ9UH17 382 aaKnown RBP12.51□□□□□ -0.41
SGCA-202ENST00000344627 PCDHB1Q9Y5F3 818 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 U3KQA8 63 aa12.51□□□□□ -0.41
SGCA-202ENST00000344627 ASXL3Q9C0F0 2248 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms