RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 IL37Q9NZH6 218 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 VNN2O95498 520 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 PIRTP0C851 137 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 PPARGP37231 505 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-201ENST00000343916 TECRLQ5HYJ1 363 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 NADSYN1Q6IA69 706 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 KIAA0408Q6ZU52 694 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 ABI1Q8IZP0 508 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 GIPC2Q8TF65 315 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 PHF21BQ96EK2 531 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 SEMA3CQ99985 751 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 PIDD1Q9HB75 910 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 TNFRSF12AQ9NP84 129 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 TLR8Q9NR97 1041 aaKnown RBP19.48■□□□□ 0.71
COL9A3-201ENST00000343916 CRYL1Q9Y2S2 319 aa19.48■□□□□ 0.71
COL9A3-201ENST00000343916 FAM92AA1XBS5 289 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 MTMR11A4FU01 709 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 FKBP6O75344 327 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 ATXN1LP0C7T5 689 aaKnown RBP19.47■□□□□ 0.71
COL9A3-201ENST00000343916 DNAJB1P25685 340 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 MAGEA11P43364 429 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 KCNQ1P51787 676 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 PRAMEP78395 509 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 FAM83EQ2M2I3 478 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 HECTD2Q5U5R9 776 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 PIM3Q86V86 326 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 CALML6Q8TD86 181 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 CNDP1Q96KN2 507 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 TSC22D3Q99576 134 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 RGSL1A5PLK6 1076 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 MROH6A6NGR9 719 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 THRAP10827 490 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 ATP5F1P24539 256 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-201ENST00000343916 MTTPP55157 894 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 CDKN2DP55273 166 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 DUSP4Q13115 394 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 MRPL58Q14197 206 aaKnown RBP19.47■□□□□ 0.71
COL9A3-201ENST00000343916 LBRQ14739 615 aaKnown RBP19.47■□□□□ 0.71
COL9A3-201ENST00000343916 RNF220Q5VTB9 566 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 TMEM207Q6UWW9 146 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 TEX26Q8N6G2 289 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 VTI1BQ9UEU0 232 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 ARL5AQ9Y689 179 aa19.47■□□□□ 0.71
COL9A3-201ENST00000343916 A0A0D9SEW6 157 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 LDB2O43679 373 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 SERINC3Q13530 473 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 GALNT3Q14435 633 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 PIWIL4Q7Z3Z4 852 aaKnown RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 TMEM173Q86WV6 379 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 BLOC1S5Q8TDH9 187 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 RCN3Q96D15 328 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 TBATAQ96M53 351 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 RANBP9Q96S59 729 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 ZNF385DQ9H6B1 395 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 MARCH5Q9NX47 278 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 TMEM161AQ9NX61 479 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 A8MT66 165 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 LTA4HP09960 611 aaKnown RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 MSX2P35548 267 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 SP3Q02447 781 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 CYLC2Q14093 348 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 ZRSR2Q15696 482 aaKnown RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 AGAP9Q5VTM2 703 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 IRGCQ6NXR0 463 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 DSELQ8IZU8 1212 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 PDCD6IPQ8WUM4 868 aaKnown RBP19.46■□□□□ 0.71
COL9A3-201ENST00000343916 HHIPL1Q96JK4 782 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 PPP1R12CQ9BZL4 782 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 VWA7Q9Y334 891 aa19.46■□□□□ 0.71
COL9A3-201ENST00000343916 DRGXA6NNA5 263 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 SLCO1B7G3V0H7 640 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 NPHS1O60500 1241 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 TLR5O60602 858 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 CLCN5P51795 746 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 SULT2A1Q06520 285 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 GPR158Q5T848 1215 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 AAGABQ6PD74 315 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 DHDDSQ86SQ9 333 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 DBF4BQ8NFT6 615 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 STARD7Q9NQZ5 370 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-201ENST00000343916 ADAMTS6Q9UKP5 1117 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 COPG1Q9Y678 874 aaKnown RBP19.45■□□□□ 0.7
COL9A3-201ENST00000343916 A0A1W2PQ45 241 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-201ENST00000343916 A0A1W2PQY0 241 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 IPO13O94829 963 aaKnown RBP19.45■□□□□ 0.7
COL9A3-201ENST00000343916 S1PR4O95977 384 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 IGLV3-27P01718 113 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 SLC4A1P02730 911 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 KCNC1P48547 511 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 KPNA2P52292 529 aaKnown RBP19.45■□□□□ 0.7
COL9A3-201ENST00000343916 HK2P52789 917 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 DSG1Q02413 1049 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 IL10RBQ08334 325 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 CDC16Q13042 620 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 LPCAT4Q643R3 524 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 TAS1R1Q7RTX1 841 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 RNF148Q8N7C7 305 aa19.45■□□□□ 0.7
COL9A3-201ENST00000343916 PHC3Q8NDX5 983 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms