RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 NMUR1Q9HB89 426 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 MYOGP15173 224 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 MEA1Q16626 185 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 BEND6Q5SZJ8 279 aaPredicted RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 MON1BQ7L1V2 547 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 SIX5Q8N196 739 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 OR4K2Q8NGD2 314 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 OR56A4Q8NGH8 313 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 KLHL29Q96CT2 875 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 FAM111AQ96PZ2 611 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 FZD10Q9ULW2 581 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 ABCA3Q99758 1704 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 TMEM114B3SHH9 223 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 SYPP08247 313 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 KRT16P08779 473 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 GTF2E2P29084 291 aaKnown RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 HNF4AP41235 474 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 GUCA1AP43080 201 aaPredicted RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 PCYOX1LQ8NBM8 494 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 SUV39H2Q9H5I1 410 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 CRTAC1Q9NQ79 661 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 ILVBLA1L0T0 632 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 C5orf60A6NFR6 353 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 ZSCAN5DPP0CG00 497 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 ACTR1BP42025 376 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 ACTR1AP61163 376 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 IRF2BP2Q7Z5L9 587 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 OR2W6PQ8NHA6 318 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 METTL21AQ8WXB1 218 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 KLHDC7BQ96G42 594 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 SLC32A1Q9H598 525 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 PSME2Q9UL46 239 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 PYGBP11216 843 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 VSNL1P62760 191 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 RFTN1Q14699 578 aaPredicted RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 FBXL22Q6P050 247 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 CFAP206Q8IYR0 622 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 TTC29Q8NA56 475 aaPredicted RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 LCN9Q8WX39 176 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 SMOQ99835 787 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 MRPL1Q9BYD6 325 aaKnown RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 IGKV6-21A0A0C4DH24 114 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 GYG2O15488 501 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 KAT7O95251 611 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 PECAM1P16284 738 aaPredicted RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 HOXA11P31270 313 aaPredicted RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 PLIN5Q00G26 463 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 NDUFA9Q16795 377 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 GKN2Q86XP6 184 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 LMNTD2Q8IXW0 634 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 PCDH20Q8N6Y1 951 aaKnown RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 ACAT2Q9BWD1 397 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 A0A087X1B8 175 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 FAM170BA6NMN3 283 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 AADACL2Q6P093 401 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 FAM46DQ8NEK8 389 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 TRIT1Q9H3H1 467 aaKnown RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
LIN54-201ENST00000340417 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
LIN54-201ENST00000340417 OR2AG2A6NM03 316 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 H0Y858 1186 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 MATN3O15232 486 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 LIASO43766 372 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 ETS1P14921 441 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 TMEM240Q5SV17 173 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 FBXW10Q5XX13 1052 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 CYB5D1Q6P9G0 228 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 FNIP1Q8TF40 1166 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 GPR174Q9BXC1 333 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 HPS4Q9NQG7 708 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
LIN54-201ENST00000340417 COG5Q9UP83 839 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 SGSM3Q96HU1 749 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 C2CD4BA6NLJ0 364 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 MEIS3P2A8K0S8 358 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 WNT9AO14904 365 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 ITGB1P05556 798 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 MYBL2P10244 700 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 SKIV2L2P42285 1042 aaKnown RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 NOVP48745 357 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 NRLP54845 237 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 FAM162AQ96A26 154 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 MTFMTQ96DP5 389 aaKnown RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 PSMD13Q9UNM6 376 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms