RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SLC9B1Q4ZJI4 515 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ARL13AQ5H913 290 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 LRRC8EQ6NSJ5 796 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 POTEHQ6S545 545 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 LAYNQ6UX15 382 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 UMODL1-AS1Q8N2C9 162 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ZNF366Q8N895 744 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 WFDC5Q8TCV5 224 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 TSGA13Q96PP4 275 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SIRPGQ9P1W8 387 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 AFF4Q9UHB7 1163 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 EVLQ9UI08 416 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 VWA8A3KMH1 1905 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 BPTFQ12830 3046 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CFAP73A6NFT4 308 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SLC35E2BP0CK96 405 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 T-ENOLP0DO92 83 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CHRM3P20309 590 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ARNTP27540 789 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CSKP41240 450 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 NDST2P52849 883 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ARMC12Q5T9G4 340 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 MSANTD2Q6P1R3 559 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CAMK1DQ8IU85 385 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 TEX9Q8N6V9 391 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 IMP4Q96G21 291 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 KIFC1Q9BW19 673 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ELAC1Q9H777 363 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 COG4Q9H9E3 785 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 DONSONQ9NYP3 566 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SEPT3Q9UH03 358 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SPO11Q9Y5K1 396 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 LRRC14BA6NHZ5 514 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 IQCF5A8MTL0 148 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 STX7O15400 261 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SRP72O76094 671 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SOD2P04179 222 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 MRPL58Q14197 206 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 KLC3Q6P597 504 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SCIMPQ6UWF3 145 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 RANBP10Q6VN20 620 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ATG14Q6ZNE5 492 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 GRIN3AQ8TCU5 1115 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 TTC1Q99614 292 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CWH43Q9H720 699 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 PRDM16Q9HAZ2 1276 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 FKBPLQ9UIM3 349 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 RAI2Q9Y5P3 530 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 INSL5Q9Y5Q6 135 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 MYOFQ9NZM1 2061 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 SUPT3HB4E1H0 165 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 SUPT3HO75486 399 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 GNRH1P01148 92 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 STK19P49842 368 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 KPNB1Q14974 876 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 HECTD2Q5U5R9 776 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CLEC6AQ6EIG7 209 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CNKSR3Q6P9H4 555 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 SHKBP1Q8TBC3 707 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 OR52B2Q96RD2 323 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 E5RI56 91 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 INSIG1O15503 277 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 FGF18O76093 207 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 TMCC1O94876 653 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 C8AP07357 584 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CNPP09543 421 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CTNNB1P35222 781 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 GTF2A1P52655 376 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 NTHL1P78549 312 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 IL10RBQ08334 325 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 DLG1Q12959 904 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 PARP15Q460N3 678 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 KDELC1Q6UW63 502 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CMTM8Q8IZV2 173 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 PHTF2Q8N3S3 785 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 FAM13CQ8NE31 585 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 ANKRD49Q8WVL7 239 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 FAM167BQ9BTA0 163 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 PAK6Q9NQU5 681 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CD3EAPO15446 510 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CCDC22O60826 627 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 SIX3O95343 332 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 MPOP05164 745 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 JUNP05412 331 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 SLC18A1P54219 525 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 GALNTL6Q49A17 601 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 SPDYAQ5MJ70 313 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 TCHHL1Q5QJ38 904 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 FAM151BQ6UXP7 276 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 TRIM67Q6ZTA4 783 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 REM2Q8IYK8 340 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 KLHL23Q8NBE8 558 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 MAPK15Q8TD08 544 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 UTP4Q969X6 686 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 HBEGFQ99075 208 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 MIPEPQ99797 713 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 TCF25Q9BQ70 676 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 ILKAPQ9H0C8 392 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms