RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FOXN2P32314 431 aa21.32■■□□□ 1
VRK2-201ENST00000340157 ETV4P43268 484 aa21.32■■□□□ 1
VRK2-201ENST00000340157 MAGEA12P43365 314 aa21.32■■□□□ 1
VRK2-201ENST00000340157 CSE1LP55060 971 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 AP1S1P61966 158 aa21.32■■□□□ 1
VRK2-201ENST00000340157 SLC20A2Q08357 652 aa21.32■■□□□ 1
VRK2-201ENST00000340157 LVRNQ6Q4G3 990 aa21.32■■□□□ 1
VRK2-201ENST00000340157 ZC3HC1Q86WB0 502 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.32■■□□□ 1
VRK2-201ENST00000340157 KIAA1958Q8N8K9 716 aa21.32■■□□□ 1
VRK2-201ENST00000340157 MDGA1Q8NFP4 955 aa21.32■■□□□ 1
VRK2-201ENST00000340157 DYDC1Q8WWB3 177 aa21.32■■□□□ 1
VRK2-201ENST00000340157 RMDN1Q96DB5 314 aa21.32■■□□□ 1
VRK2-201ENST00000340157 ZFYVE19Q96K21 471 aa21.32■■□□□ 1
VRK2-201ENST00000340157 DNAJC1Q96KC8 554 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 SRPK1Q96SB4 655 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 FBXO10Q9UK96 956 aa21.32■■□□□ 1
VRK2-201ENST00000340157 ANKRD66B4E2M5 251 aa21.31■■□□□ 1
VRK2-201ENST00000340157 TM9SF1O15321 606 aa21.31■■□□□ 1
VRK2-201ENST00000340157 AHSGP02765 367 aa21.31■■□□□ 1
VRK2-201ENST00000340157 SLC8A1P32418 973 aa21.31■■□□□ 1
VRK2-201ENST00000340157 SPRP35270 261 aaPredicted RBP21.31■■□□□ 1
VRK2-201ENST00000340157 CSNK1DP48730 415 aa21.31■■□□□ 1
VRK2-201ENST00000340157 QPCTQ16769 361 aa21.31■■□□□ 1
VRK2-201ENST00000340157 ZNF470Q6ECI4 717 aa21.31■■□□□ 1
VRK2-201ENST00000340157 NLRP9Q7RTR0 991 aa21.31■■□□□ 1
VRK2-201ENST00000340157 TAX1BP1Q86VP1 789 aa21.31■■□□□ 1
VRK2-201ENST00000340157 C12orf40Q86WS4 652 aa21.31■■□□□ 1
VRK2-201ENST00000340157 CAMK1DQ8IU85 385 aa21.31■■□□□ 1
VRK2-201ENST00000340157 C2CD4AQ8NCU7 369 aaPredicted RBP21.31■■□□□ 1
VRK2-201ENST00000340157 OR13C4Q8NGS5 318 aa21.31■■□□□ 1
VRK2-201ENST00000340157 PDCD6IPQ8WUM4 868 aaKnown RBP21.31■■□□□ 1
VRK2-201ENST00000340157 PPP2R3CQ969Q6 453 aa21.31■■□□□ 1
VRK2-201ENST00000340157 HDAC10Q969S8 669 aa21.31■■□□□ 1
VRK2-201ENST00000340157 VPS39Q96JC1 886 aa21.31■■□□□ 1
VRK2-201ENST00000340157 CCT8L2Q96SF2 557 aa21.31■■□□□ 1
VRK2-201ENST00000340157 UNC80Q8N2C7 3258 aa21.31■■□□□ 1
VRK2-201ENST00000340157 EYSQ5T1H1 3165 aa21.31■■□□□ 1
VRK2-201ENST00000340157 TRAFD1O14545 582 aaPredicted RBP21.3■■□□□ 1
VRK2-201ENST00000340157 PIGNO95427 931 aa21.3■■□□□ 1
VRK2-201ENST00000340157 ARSAP15289 507 aa21.3■■□□□ 1
VRK2-201ENST00000340157 GMPRP36959 345 aa21.3■■□□□ 1
VRK2-201ENST00000340157 ZNF140P52738 457 aaPredicted RBP21.3■■□□□ 1
VRK2-201ENST00000340157 PDE1CQ14123 709 aaPredicted RBP21.3■■□□□ 1
VRK2-201ENST00000340157 GEN1Q17RS7 908 aa21.3■■□□□ 1
VRK2-201ENST00000340157 NEPROQ6NW34 567 aa21.3■■□□□ 1
VRK2-201ENST00000340157 CMC1Q7Z7K0 106 aa21.3■■□□□ 1
VRK2-201ENST00000340157 NDUFAF2Q8N183 169 aa21.3■■□□□ 1
VRK2-201ENST00000340157 PNPLA1Q8N8W4 532 aa21.3■■□□□ 1
VRK2-201ENST00000340157 BPIFB1Q8TDL5 484 aa21.3■■□□□ 1
VRK2-201ENST00000340157 CHMP6Q96FZ7 201 aa21.3■■□□□ 1
VRK2-201ENST00000340157 PAIP2Q9BPZ3 127 aaKnown RBP21.3■■□□□ 1
VRK2-201ENST00000340157 SLC13A1Q9BZW2 595 aa21.3■■□□□ 1
VRK2-201ENST00000340157 NSMCE4AQ9NXX6 385 aa21.3■■□□□ 1
VRK2-201ENST00000340157 SPTBN5Q9NRC6 3674 aaKnown RBP21.3■■□□□ 1
VRK2-201ENST00000340157 OR51F1A6NGY5 319 aa21.3■■□□□ 1
VRK2-201ENST00000340157 OTOL1A6NHN0 477 aaPredicted RBP21.3■■□□□ 1
VRK2-201ENST00000340157 COPEO14579 308 aa21.3■■□□□ 1
VRK2-201ENST00000340157 FAM107AO95990 144 aa21.3■■□□□ 1
VRK2-201ENST00000340157 DHRS4L1P0CG22 281 aa21.3■■□□□ 1
VRK2-201ENST00000340157 DRD4P21917 467 aa21.3■■□□□ 1
VRK2-201ENST00000340157 C22orf39Q6P5X5 142 aa21.3■■□□□ 1
VRK2-201ENST00000340157 METTL3Q86U44 580 aaKnown RBP21.3■■□□□ 1
VRK2-201ENST00000340157 MFSD6LQ8IWD5 586 aa21.3■■□□□ 1
VRK2-201ENST00000340157 PTPRN2Q92932 1015 aa21.3■■□□□ 1
VRK2-201ENST00000340157 PEX13Q92968 403 aa21.3■■□□□ 1
VRK2-201ENST00000340157 TBATAQ96M53 351 aa21.3■■□□□ 1
VRK2-201ENST00000340157 FAM111AQ96PZ2 611 aa21.3■■□□□ 1
VRK2-201ENST00000340157 ADGRE3Q9BY15 652 aa21.3■■□□□ 1
VRK2-201ENST00000340157 RHOJQ9H4E5 214 aa21.3■■□□□ 1
VRK2-201ENST00000340157 SUDS3Q9H7L9 328 aaPredicted RBP21.3■■□□□ 1
VRK2-201ENST00000340157 TRPV4Q9HBA0 871 aa21.3■■□□□ 1
VRK2-201ENST00000340157 SNX15Q9NRS6 342 aa21.3■■□□□ 1
VRK2-201ENST00000340157 GDE1Q9NZC3 331 aa21.3■■□□□ 1
VRK2-201ENST00000340157 SLCO3A1Q9UIG8 710 aa21.3■■□□□ 1
VRK2-201ENST00000340157 PCDHB9Q9Y5E1 797 aa21.3■■□□□ 1
VRK2-201ENST00000340157 SCN8AQ9UQD0 1980 aa21.3■■□□□ 1
VRK2-201ENST00000340157 HEPACAM2A8MVW5 462 aa21.29■■□□□ 1
VRK2-201ENST00000340157 SLC7A4O43246 635 aa21.29■■□□□ 1
VRK2-201ENST00000340157 HOXC11O43248 304 aaPredicted RBP21.29■■□□□ 1
VRK2-201ENST00000340157 HTRA2O43464 458 aaPredicted RBP21.29■■□□□ 1
VRK2-201ENST00000340157 CISD3P0C7P0 127 aa21.29■■□□□ 1
VRK2-201ENST00000340157 ADH5P11766 374 aa21.29■■□□□ 1
VRK2-201ENST00000340157 CSRP3P50461 194 aa21.29■■□□□ 1
VRK2-201ENST00000340157 TMPRSS15P98073 1019 aa21.29■■□□□ 1
VRK2-201ENST00000340157 ECT2LQ008S8 904 aa21.29■■□□□ 1
VRK2-201ENST00000340157 PDE1BQ01064 536 aa21.29■■□□□ 1
VRK2-201ENST00000340157 THOC5Q13769 683 aaKnown RBP21.29■■□□□ 1
VRK2-201ENST00000340157 GRM3Q14832 879 aa21.29■■□□□ 1
VRK2-201ENST00000340157 GAB4Q2WGN9 574 aa21.29■■□□□ 1
VRK2-201ENST00000340157 PPM1JQ5JR12 505 aa21.29■■□□□ 1
VRK2-201ENST00000340157 LRRC34Q8IZ02 419 aa21.29■■□□□ 1
VRK2-201ENST00000340157 ZNF557Q8N988 423 aaPredicted RBP21.29■■□□□ 1
VRK2-201ENST00000340157 OR2AP1Q8NGE2 309 aa21.29■■□□□ 1
VRK2-201ENST00000340157 ACMSDQ8TDX5 336 aa21.29■■□□□ 1
VRK2-201ENST00000340157 PIH1D2Q8WWB5 315 aa21.29■■□□□ 1
VRK2-201ENST00000340157 MAGEB18Q96M61 343 aa21.29■■□□□ 1
VRK2-201ENST00000340157 GPR22Q99680 433 aa21.29■■□□□ 1
VRK2-201ENST00000340157 FAM167BQ9BTA0 163 aa21.29■■□□□ 1
VRK2-201ENST00000340157 SLC2A11Q9BYW1 496 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms