RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FITM2Q8N6M3 262 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 BRSK1Q8TDC3 778 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 ELMO2Q96JJ3 720 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 LBHD1Q9BQE6 289 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 UNKQ9C0B0 810 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 CERS4Q9HA82 394 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 HCFC2Q9Y5Z7 792 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 LMAN2Q12907 356 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 INSCQ1MX18 579 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 MPPE1Q53F39 396 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 RBM20Q5T481 1227 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 CLEC14AQ86T13 490 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 C10orf107Q8IVU9 208 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 CPXM2Q8N436 756 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 C10orf82Q8WW14 230 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 TLK1Q9UKI8 766 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 ARHGAP26Q9UNA1 814 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 KLF11O14901 512 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 BIRC5O15392 142 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 CLASP2O75122 1294 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 SLC35E2BP0CK96 405 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 BMP1P13497 986 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 TRAF2Q12933 501 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 PPP1R14CQ8TAE6 165 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 KDM4CQ9H3R0 1056 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 CPSF2Q9P2I0 782 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 ZNF510Q9Y2H8 683 aa22.55■■□□□ 1.2
PDLIM2-203ENST00000339162 A0A0G2JND7 137 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 UBOX5O94941 541 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 GLRBP48167 497 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 RNF43Q68DV7 783 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 NLRP9Q7RTR0 991 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 GRASPQ7Z6J2 395 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 CILP2Q8IUL8 1156 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 DCAF4L2Q8NA75 395 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 MDGA1Q8NFP4 955 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 USP13Q92995 863 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 MTIF3Q9H2K0 278 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 COPG2Q9UBF2 871 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 C5orf42Q9H799 3197 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 MTCL1Q9Y4B5 1905 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 SLC7A4O43246 635 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 PRAMEF12O95522 483 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 TROVE2P10155 538 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 CSRP3P50461 194 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 EPHA5P54756 1037 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 TAS2R39P59534 338 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 CBX2Q14781 532 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 INO80DQ53TQ3 878 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 ATG16L1Q676U5 607 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 MBLAC2Q68D91 279 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 KCTD4Q8WVF5 259 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 ING5Q8WYH8 240 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 ZSWIM3Q96MP5 696 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 MARCOQ9UEW3 520 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 RWDD3Q9Y3V2 267 aa22.54■■□□□ 1.2
PDLIM2-203ENST00000339162 C5orf67F2Z3F1 127 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 GOT2P00505 430 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 PRSS56P0CW18 603 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 KITP10721 976 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 FGF3P11487 239 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 UBE3AQ05086 875 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 NCEH1Q6PIU2 408 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 TMEM25Q86YD3 366 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 TRIM42Q8IWZ5 723 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 CALML6Q8TD86 181 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 RPL10LQ96L21 214 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 OMDQ99983 421 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 C2orf49Q9BVC5 232 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 MFSD1Q9H3U5 465 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 TASP1Q9H6P5 420 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 INTS6Q9UL03 887 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 PRRC2BQ5JSZ5 2229 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 MYOFQ9NZM1 2061 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 CCDC162PA2VCL2 907 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 LYPLA1O75608 230 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 STMN1P16949 149 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 HADHAP40939 763 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 ABL2P42684 1182 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 RAB10P61026 200 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 STX3Q13277 289 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 GLT6D1Q7Z4J2 308 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 EFHBQ8N7U6 833 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 C1QTNF1Q9BXJ1 281 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 TRIM55Q9BYV6 548 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 LINC00597Q9H2U6 94 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 NMRAL1Q9HBL8 299 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 USH1CQ9Y6N9 552 aa22.53■■□□□ 1.2
PDLIM2-203ENST00000339162 ITM2AO43736 263 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 CPA3P15088 417 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 GKP32189 559 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 LEPRP48357 1165 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 OCRLQ01968 901 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 ABCB8Q9NUT2 735 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 TDP1Q9NUW8 608 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 RUVBL2Q9Y230 463 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 CRYL1Q9Y2S2 319 aa22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 ARIH1Q9Y4X5 557 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-203ENST00000339162 ANKRD66B4E2M5 251 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 GSTA1P08263 222 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms