RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 THOC5Q13769 683 aaKnown RBP15.55■□□□□ 0.08
LIMS1-202ENST00000338045 TCEAL5Q5H9L2 206 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 DGKKQ5KSL6 1271 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 CDHR3Q6ZTQ4 885 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 KIAA0408Q6ZU52 694 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 ADIPOR2Q86V24 386 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 DCLK2Q8N568 766 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 GDAP1Q8TB36 358 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 CALML6Q8TD86 181 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 BPIFB1Q8TDL5 484 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 PTPRN2Q92932 1015 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 RMDN1Q96DB5 314 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 VPS39Q96JC1 886 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 SRPK1Q96SB4 655 aaKnown RBP15.55■□□□□ 0.08
LIMS1-202ENST00000338045 CCT8L2Q96SF2 557 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 MFSD1Q9H3U5 465 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 SLC17A7Q9P2U7 560 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 GRID1Q9ULK0 1009 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 KCTD3Q9Y597 815 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 SPO11Q9Y5K1 396 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 ARL5AQ9Y689 179 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 LINC01565O15544 149 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 HTRA2O43464 458 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 CRTAMO95727 393 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 IGSF6O95976 241 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 AHSGP02765 367 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 HADHAP40939 763 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 STK19P49842 368 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 CSRP3P50461 194 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 PDE1BQ01064 536 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 QPCTQ16769 361 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 LVRNQ6Q4G3 990 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 RGS9BPQ6ZS82 235 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 GALNT7Q86SF2 657 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 DENND6AQ8IWF6 608 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 LMNTD2Q8IXW0 634 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 NDUFAF2Q8N183 169 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 LPCAT1Q8NF37 534 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 OR2AP1Q8NGE2 309 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 SPOCK2Q92563 424 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 VOPP1Q96AW1 172 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 ASIC4Q96FT7 647 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 RPL10LQ96L21 214 aaKnown RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 GPR22Q99680 433 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 CEP44Q9C0F1 390 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 PLLPQ9Y342 182 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 ANKRD36A6QL64 1941 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 TRAFD1O14545 582 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 SOCS5O75159 536 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 PGLSO95336 258 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 PIRTP0C851 137 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 HOXB8P17481 243 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 DRD4P21917 467 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 SLC1A2P43004 574 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 CCT5P48643 541 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 ZNF140P52738 457 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 RPL26P61254 145 aaKnown RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 ECT2LQ008S8 904 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 TAF1AQ15573 450 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 HHATQ5VTY9 493 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 ZNF470Q6ECI4 717 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 C22orf39Q6P5X5 142 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 GET4Q7L5D6 327 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 TAX1BP1Q86VP1 789 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 AHI1Q8N157 1196 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 MDGA1Q8NFP4 955 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 GABPB2Q8TAK5 448 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 HDAC10Q969S8 669 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 APOL5Q9BWW9 433 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 RABEP2Q9H5N1 569 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 PCMTD2Q9NV79 361 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 EVLQ9UI08 416 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 CDH22Q9UJ99 828 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 SLC25A13Q9UJS0 675 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 FBXO5Q9UKT4 447 aa15.54■□□□□ 0.08
LIMS1-202ENST00000338045 RPL26L1Q9UNX3 145 aaKnown RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 MTO1Q9Y2Z2 717 aaKnown RBP15.54■□□□□ 0.08
LIMS1-202ENST00000338045 BPTFQ12830 3046 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 NDUFAB1O14561 156 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 RPP40O75818 363 aaKnown RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 ADH1CP00326 375 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 GSRP00390 522 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 F7P08709 466 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 ADH5P11766 374 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 FCARP24071 287 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 FOXN2P32314 431 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 GRIA4P48058 902 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 SERPINB8P50452 374 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 SNRPD1P62314 119 aaKnown RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 CTBP1Q13363 440 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 PDE1CQ14123 709 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 PDK4Q16654 411 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 TMEM215Q68D42 235 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 GLT6D1Q7Z4J2 308 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 CAMK1DQ8IU85 385 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 PCDH20Q8N6Y1 951 aaKnown RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 DNAJC1Q96KC8 554 aaKnown RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 TBATAQ96M53 351 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 SLC13A1Q9BZW2 595 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 VPS11Q9H270 941 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms