RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FDFT1P37268 417 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 FNTAP49354 379 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 DHPSP49366 369 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 CCR5P51681 352 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 ADPRHP54922 357 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 WNT3AP56704 352 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 RPS21P63220 83 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 SGCGQ13326 291 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 PCSK7Q16549 785 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 WDR45BQ5MNZ6 344 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM182AQ5T1J6 154 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 KIAA0895LQ68EN5 471 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 CCDC137Q6PK04 289 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 KDELC2Q7Z4H8 507 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 DEFB119Q8N690 84 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 C12orf50Q8NA57 414 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 PIH1D2Q8WWB5 315 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 TADA1Q96BN2 335 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 RMDN1Q96DB5 314 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 SCRN2Q96FV2 425 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 LOXL4Q96JB6 756 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 RUNDC3BQ96NL0 473 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 SRPK1Q96SB4 655 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 TDRD1Q9BXT4 1180 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 PCDH12Q9NPG4 1184 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 UBP1Q9NZI7 540 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 MUC22E2RYF6 1773 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 MEI4A8MW99 385 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 ANKRD66B4E2M5 251 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 F5H423 210 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 AREL1O15033 823 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 FANCGO15287 622 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 FZD6O60353 706 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 NDST3O95803 873 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 GAS8O95995 478 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 PDHA1P08559 390 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 PSMB4P28070 264 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 NBL1P41271 181 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 DPP6P42658 865 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 ABL2P42684 1182 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 LMAN1P49257 510 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 GDF10P55107 478 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 TAS2R38P59533 333 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 IHHQ14623 411 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 TMEM52BQ4KMG9 183 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 PMS2CLQ68D20 193 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 KIAA1161Q6NSJ0 714 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 KDELC1Q6UW63 502 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 USP45Q70EL2 814 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 ZSWIM9Q86XI8 627 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 RGL4Q8IZJ4 473 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 LPCAT1Q8NF37 534 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 CXorf40AQ8TE69 158 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 MLPHQ9BV36 600 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 FSD1LQ9BXM9 530 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 EPC1Q9H2F5 836 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 C6orf106Q9H6K1 298 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 CDC23Q9UJX2 597 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 PPIL1Q9Y3C6 166 aa11.98□□□□□ -0.49
SPTLC1-202ENST00000337841 LOC285095A0A1B0GVY8 99 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 A0A1W2PQU0 124 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 ERI2A8K979 691 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 E7EVH7 732 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 PDE2AO00408 941 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 METTL18O95568 372 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 PRLP01236 227 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 KRT14P02533 472 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 ETS1P14921 441 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 CTPS1P17812 591 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 ITIH2P19823 946 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 VIPR1P32241 457 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 RPL22P35268 128 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 DEKP35659 375 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 GRIA4P48058 902 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 CKAP4Q07065 602 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 LYSMD4Q5XG99 296 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 TTC27Q6P3X3 843 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 TRIM69Q86WT6 500 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 HORMAD1Q86X24 394 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 KLHL7Q8IXQ5 586 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 IPMKQ8NFU5 416 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 OXNAD1Q96HP4 312 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 HSPA12BQ96MM6 686 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 ETNK1Q9HBU6 452 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 RAB6BQ9NRW1 208 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM86C1Q9NVL1 165 aa11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 NYNRINQ9P2P1 1898 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-202ENST00000337841 CKAP5Q14008 2032 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 IGLON5A6NGN9 336 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 A8MX80 341 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 MMP20O60882 483 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 TM7SF2O76062 418 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 ECEL1O95672 775 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 AGTP01019 485 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 TRBC1P01850 177 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LMNAP02545 664 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 PRKCGP05129 697 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms