RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 PKNOX1P55347 436 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 GRM3Q14832 879 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 EPS8L1Q8TE68 723 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 EHD1Q9H4M9 534 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 MAP2K7O14733 419 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 IFNGP01579 166 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 NR2F6P10588 404 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 CTSEP14091 401 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 WEE1P30291 646 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 SHMT1P34896 483 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 GPR180Q86V85 440 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 PCDH20Q8N6Y1 951 aaKnown RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 RNF148Q8N7C7 305 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ZNF540Q8NDQ6 660 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 GIPC3Q8TF64 312 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 PSMB4P28070 264 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 CDK9P50750 372 aaKnown RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 ZFP69Q49AA0 526 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 BBS12Q6ZW61 710 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 BPIFB6Q8NFQ5 453 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 HELQQ8TDG4 1101 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 PYDC1Q8WXC3 89 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 IL25Q9H293 177 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 TRPS1Q9UHF7 1281 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ZNF510Q9Y2H8 683 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 TGDSO95455 350 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 ASGR1P07306 291 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 USP17L7P0C7H9 530 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 NAGLUP54802 743 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 POTEHQ6S545 545 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 HIPK1Q86Z02 1210 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 HJURPQ8NCD3 748 aaPredicted RBP13.15□□□□□ -0.31
HLCS-201ENST00000336648 TIFAQ96CG3 184 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 IDI2Q9BXS1 227 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.31
HLCS-201ENST00000336648 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.31
HLCS-201ENST00000336648 PRODHO43272 600 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 NR2F1P10589 423 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 GRIA4P48058 902 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 IL18R1Q13478 541 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 AUHQ13825 339 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 MPP2Q14168 576 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 LY6KQ17RY6 165 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 ACSS3Q9H6R3 686 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 MRPS7Q9Y2R9 242 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 LMTK2Q8IWU2 1503 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 MDM4O15151 490 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 CCR3P51677 355 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 GTF2BQ00403 316 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 CES3Q6UWW8 571 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 PACS1Q6VY07 963 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 UNC5AQ6ZN44 842 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 FNDC11Q9BVV2 318 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 BHLHE41Q9C0J9 482 aaPredicted RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 TOR4AQ9NXH8 423 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 MRTO4Q9UKD2 239 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 MSCO60682 206 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 AVILO75366 819 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 KRT36O76013 467 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 DHFRP00374 187 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 FGF1P05230 155 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 DBTP11182 482 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 FAM46CQ5VWP2 391 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 MEIOBQ8N635 442 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 OR52K1Q8NGK4 314 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 ZC3H10Q96K80 434 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 EBNA1BP2Q99848 306 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 CLK4Q9HAZ1 481 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 TMEM165Q9HC07 324 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SLC12A4Q9UP95 1085 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SLC25A12O75746 678 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 TCEA3O75764 348 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 CCNB1P14635 433 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 PLK1P53350 603 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 LMAN2LQ9H0V9 348 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 ZDHHC6Q9H6R6 413 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 COG5Q9UP83 839 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 DDTLA6NHG4 134 aaPredicted RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 FAM86B1E9PN63 330 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SERPINA1P01009 418 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 FAM86B2P0C5J1 330 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 TFEBP19484 476 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms