RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 AURKAO14965 403 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 MSI1O43347 362 aaKnown RBP16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 TNFAIP8O95379 198 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 PGK1P00558 417 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 S100BP04271 92 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 MAXP61244 160 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 STX5Q13190 355 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 MFSD10Q14728 455 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 PIGGQ5H8A4 983 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 PITRM1Q5JRX3 1037 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 CNSTQ6PJW8 725 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 RDH11Q8TC12 318 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 NT5C3BQ969T7 300 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 TMIGD2Q96BF3 282 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 CCDC28BQ9BUN5 200 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 FAM32AQ9Y421 112 aaKnown RBP16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 TLL2Q9Y6L7 1015 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 GALNT2Q10471 571 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 BTBD8Q5XKL5 378 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 SCN4BQ8IWT1 228 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 NUP93Q8N1F7 819 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 TXNDC5Q8NBS9 432 aaKnown RBP16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 SHCBP1Q8NEM2 672 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 NTAN1Q96AB6 310 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 AP4S1Q9Y587 144 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 SHROOM3Q8TF72 1996 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 M0QZ92 97 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 AP3B1O00203 1094 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 PSMD12O00232 456 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 AKAP10O43572 662 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 THP07101 528 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 DPP6P42658 865 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 ARPC4P59998 168 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 STX1BP61266 288 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 RBM20Q5T481 1227 aaKnown RBP16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 FAM219BQ5XKK7 198 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 KCTD11Q693B1 232 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 CLEC6AQ6EIG7 209 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 TFAP2DQ7Z6R9 452 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 LILRA2Q8N149 483 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 KCTD13Q8WZ19 329 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 CCT7Q99832 543 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 TIMMDC1Q9NPL8 285 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 NOX1Q9Y5S8 564 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 ANKRD12Q6UB98 2062 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 SMIM35A0A1B0GVV1 85 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 PSMD3O43242 534 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 CPB1P15086 417 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 MAGEA12P43365 314 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 LHX1P48742 406 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 CDH13P55290 713 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 TGFBIQ15582 683 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 PPP1R3AQ16821 1122 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 IQCF2Q8IXL9 164 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 SCAMP5Q8TAC9 235 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 LRTOMTQ8WZ04 291 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 SLC39A3Q9BRY0 314 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 NDUFA13Q9P0J0 144 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 PRELID1Q9Y255 219 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 FADS3Q9Y5Q0 445 aa16.62■□□□□ 0.25
CDC42EP4-201ENST00000335793 ARHGEF37A1IGU5 675 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 C9JVG2 144 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 E7ENX8 843 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 STRNO43815 780 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 RNASEH2AO75792 299 aaKnown RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 SEC24DO94855 1032 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 ATP5F1P24539 256 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 ARL1P40616 181 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 SLC5A3P53794 718 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 PIWIL4Q7Z3Z4 852 aaKnown RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 MYO1HQ8N1T3 1032 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 OR9I1Q8NGQ6 314 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 GABPB2Q8TAK5 448 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 KLHL32Q96NJ5 620 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 GLOD4Q9HC38 313 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 SACM1LQ9NTJ5 587 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 CRYL1Q9Y2S2 319 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 TIMM22Q9Y584 194 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 GPC6Q9Y625 555 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 FUOMA2VDF0 154 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 TRIM64CA6NLI5 447 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 POMCP01189 267 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 SBK3P0C264 359 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 KCNE1P15382 129 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 AXLP30530 894 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 SCNN1GP51170 649 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 AGAP9Q5VTM2 703 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 IFNEQ86WN2 208 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 LSMEM2Q8N112 164 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZMIZ2Q8NF64 920 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 ADCY4Q8NFM4 1077 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 SMARCD1Q96GM5 515 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 CIB1Q99828 191 aa16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 MRPL57Q9BQC6 102 aaKnown RBP16.61■□□□□ 0.25
CDC42EP4-201ENST00000335793 EML4Q9HC35 981 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms