RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 RDH11Q8TC12 318 aa13.57□□□□□ -0.24
LMO1-201ENST00000335790 C2orf49Q9BVC5 232 aaPredicted RBP13.57□□□□□ -0.24
LMO1-201ENST00000335790 MAN1C1Q9NR34 630 aa13.57□□□□□ -0.24
LMO1-201ENST00000335790 NLE1Q9NVX2 485 aaPredicted RBP13.57□□□□□ -0.24
LMO1-201ENST00000335790 ZDHHC7Q9NXF8 308 aa13.57□□□□□ -0.24
LMO1-201ENST00000335790 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMO1-201ENST00000335790 KIAA1522Q9P206 1035 aaPredicted RBP13.57□□□□□ -0.24
LMO1-201ENST00000335790 COPG2Q9UBF2 871 aa13.57□□□□□ -0.24
LMO1-201ENST00000335790 MID2Q9UJV3 735 aa13.57□□□□□ -0.24
LMO1-201ENST00000335790 CORO1CQ9ULV4 474 aaPredicted RBP13.57□□□□□ -0.24
LMO1-201ENST00000335790 FAM95CA0A1B0GW59 222 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 CCDC78A2IDD5 438 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 GRM6O15303 877 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 RPP40O75818 363 aaKnown RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 WISP3O95389 354 aaPredicted RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 CRTAMO95727 393 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 SLC35E2BP0CK96 405 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 FGF3P11487 239 aaPredicted RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 HOXB8P17481 243 aaPredicted RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 OGNP20774 298 aaKnown RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 GRK2P25098 689 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 WEE1P30291 646 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ALDH3A1P30838 453 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 SCNN1BP51168 640 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ARSDP51689 593 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ZNF140P52738 457 aaPredicted RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 RAB10P61026 200 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 AP1S1P61966 158 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 MPP1Q00013 466 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 CTBP1Q13363 440 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 TAF1AQ15573 450 aaPredicted RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 ARHGAP15Q53QZ3 475 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 FASTKD1Q53R41 847 aaKnown RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 GPR158Q5T848 1215 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 CES4AQ5XG92 561 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ZNF470Q6ECI4 717 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 RETSATQ6NUM9 610 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 C16orf46Q6P387 395 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 CILP2Q8IUL8 1156 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 SH3RF2Q8TEC5 729 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 USP13Q92995 863 aaPredicted RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 RMDN2Q96LZ7 410 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 MECRQ9BV79 373 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 TRIM55Q9BYV6 548 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 PRDM6Q9NQX0 595 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ABCF3Q9NUQ8 709 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ABCB8Q9NUT2 735 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 HACD3Q9P035 362 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 DPP7Q9UHL4 492 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 VPS28Q9UK41 221 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 SLC39A10Q9ULF5 831 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 SLC12A4Q9UP95 1085 aa13.56□□□□□ -0.24
LMO1-201ENST00000335790 ZNF106Q9H2Y7 1883 aaKnown RBP13.56□□□□□ -0.24
LMO1-201ENST00000335790 A0A087X1B8 175 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 TARM1B6A8C7 271 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 MYO1CO00159 1063 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 XYLBO75191 536 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 HAUS5O94927 633 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 S1PR4O95977 384 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 PENKP01210 267 aaPredicted RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 RHOP08100 348 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 DLDP09622 509 aaKnown RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 GJA1P17302 382 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 IRS1P35568 1242 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 SLC26A3P40879 764 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 MAPK8P45983 427 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 PRKAA2P54646 552 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 RPL26P61254 145 aaKnown RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 ERVK-21P61565 698 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 ACTN3Q08043 901 aaPredicted RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 LMAN2Q12907 356 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 TRAF2Q12933 501 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 USP4Q13107 963 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 STX3Q13277 289 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 GALNT3Q14435 633 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 USP10Q14694 798 aaKnown RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 DLG2Q15700 870 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 CHI3L2Q15782 390 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 SMAD1Q15797 465 aaKnown RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 TYSND1Q2T9J0 566 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 PLEKHG6Q3KR16 790 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 RNF187Q5TA31 235 aaPredicted RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 TMEM151AQ8N4L1 468 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 ZNF557Q8N988 423 aaPredicted RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 HDAC10Q969S8 669 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 OTUB2Q96DC9 234 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 TCEAL4Q96EI5 215 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 ADGRE3Q9BY15 652 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 CAB39LQ9H9S4 337 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 KCNK13Q9HB14 408 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 THAP1Q9NVV9 213 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 TLK1Q9UKI8 766 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 RPL26L1Q9UNX3 145 aaKnown RBP13.55□□□□□ -0.24
LMO1-201ENST00000335790 CHKBQ9Y259 395 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms