RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CYP4A22Q5TCH4 519 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 GPAT2Q6NUI2 795 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 PIWIL4Q7Z3Z4 852 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 CCDC28AQ8IWP9 274 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZFPM1Q8IX07 1006 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 CMTR2Q8IYT2 770 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 DCLK2Q8N568 766 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 KDM1BQ8NB78 822 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 FAM156AQ8NDB6 213 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 CXorf38Q8TB03 319 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DYNC2LI1Q8TCX1 351 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 HDAC10Q969S8 669 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 MCRS1Q96EZ8 462 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 FAM84AQ96KN4 292 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZNF560Q96MR9 790 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 APBA2Q99767 749 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 AIFM2Q9BRQ8 373 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 FAM213AQ9BRX8 229 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ING2Q9H160 280 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 RPAP3Q9H6T3 665 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 SPC25Q9HBM1 224 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
SKA2-201ENST00000330137 GTF2IRD1Q9UHL9 959 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZDHHC2Q9UIJ5 367 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 AGO2Q9UKV8 859 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 MRPL11Q9Y3B7 192 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 A0A096LPK6 155 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 CCDC78A2IDD5 438 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 TYW5A2RUC4 315 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 ZNF99A8MXY4 864 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 EI24O14681 340 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 NDUFS2O75306 463 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 CCNKO75909 580 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 PRSS23O95084 383 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 KCNH1O95259 989 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 NDST3O95803 873 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 LDLRP01130 860 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 AMHP03971 560 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 CCDC159P0C7I6 412 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 GFAPP14136 432 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 HOXB6P17509 224 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 ATP2B4P23634 1241 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 TM4SF1P30408 202 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 AXLP30530 894 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 UGT2B10P36537 528 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 PTPN9P43378 593 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 JAK3P52333 1124 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 CDH6P55285 790 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 DEFA1P59665 94 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 DEFA3P59666 94 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 RAD51Q06609 339 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 FADDQ13158 208 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 PRKG1Q13976 671 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 KCNT1Q5JUK3 1230 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 NXNQ6DKJ4 435 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 ADCK1Q86TW2 530 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 HORMAD1Q86X24 394 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 RIOX2Q8IUF8 465 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 KIAA0319LQ8IZA0 1049 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 C8orf59Q8N0T1 100 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 TAB3Q8N5C8 712 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 PCDH20Q8N6Y1 951 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 SLC2A14Q8TDB8 520 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 STYXQ8WUJ0 223 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 CERS2Q96G23 380 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 FEM1AQ9BSK4 669 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 TRAF4Q9BUZ4 470 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 GON7Q9BXV9 100 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 ACE2Q9BYF1 805 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 FBXO28Q9NVF7 368 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 IL20Q9NYY1 176 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 DTLQ9NZJ0 730 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 RABL2BQ9UNT1 228 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 DAGLAQ9Y4D2 1042 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 PCDHGA3Q9Y5H0 932 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 MAU2Q9Y6X3 613 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 NEMP1O14524 444 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 HNRNPDLO14979 420 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 MDM4O15151 490 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 POLR1CO15160 346 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 RAD51BO15315 384 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 GPC4O75487 556 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 GABBR2O75899 941 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 ASS1P00966 412 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 CHRNA1P02708 482 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 ARP10275 920 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 CTRB1P17538 263 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 ATP6V1B2P21281 511 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 NR4A1P22736 598 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 HTR1BP28222 390 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 HOXA13P31271 388 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 ETV3P41162 512 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 KPNA2P52292 529 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 AP2S1P53680 142 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 MVKQ03426 396 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.43□□□□□ -1.06
SKA2-201ENST00000330137 RSBN1Q5VWQ0 802 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 CTRB2Q6GPI1 263 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms