RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 HS6ST3Q8IZP7 471 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 DNAAF3Q8N9W5 541 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 KREMEN2Q8NCW0 462 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 RFWD2Q8NHY2 731 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 PIH1D2Q8WWB5 315 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 BADQ92934 168 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 OTUB2Q96DC9 234 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 MAELQ96JY0 434 aaKnown RBP7.21□□□□□ -1.25
NPHP1-201ENST00000316534 TUBGCP5Q96RT8 1024 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 YME1L1Q96TA2 773 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 SEMA3CQ99985 751 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 CCDC106Q9BWC9 280 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 P2RY12Q9H244 342 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 PCMTD2Q9NV79 361 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 POLR3BQ9NW08 1133 aaPredicted RBP7.21□□□□□ -1.25
NPHP1-201ENST00000316534 PIH1D1Q9NWS0 290 aaKnown RBP7.21□□□□□ -1.25
NPHP1-201ENST00000316534 UBP1Q9NZI7 540 aa7.21□□□□□ -1.25
NPHP1-201ENST00000316534 LRRK1Q38SD2 2015 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 LCHNA4D1U4 455 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 UNC5CO95185 931 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 RHOCP08134 193 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 ERVK-21P61565 698 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 PDE1BQ01064 536 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 IFT88Q13099 833 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF177Q13360 481 aaPredicted RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 SEMA3AQ14563 771 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 PLPP4Q5VZY2 271 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 CTAGE3PQ8IX95 158 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF557Q8N988 423 aaPredicted RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 CCDC63Q8NA47 563 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 SLC7A6OSQ96CW6 309 aaPredicted RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 L3HYPDHQ96EM0 354 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 DRC3Q9H069 523 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 MLXIPLQ9NP71 852 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 MCM8Q9UJA3 840 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 SPO11Q9Y5K1 396 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 CPQQ9Y646 472 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 LEFTY2O00292 366 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 SERPINF2P08697 491 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 MYL4P12829 197 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 RPS3P23396 243 aaKnown RBP eCLIP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 MAPK8P45983 427 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 CD151P48509 253 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 ARSDP51689 593 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 FASTKD1Q53R41 847 aaKnown RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 PPM1JQ5JR12 505 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 NEPROQ6NW34 567 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 TMEM207Q6UWW9 146 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 RNF165Q6ZSG1 346 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 LSMEM2Q8N112 164 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 CFAP52Q8N1V2 620 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 NSMCE1Q8WV22 266 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 DYDC1Q8WWB3 177 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 AUTS2Q8WXX7 1259 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 PDLIM5Q96HC4 596 aaKnown RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 MCCC1Q96RQ3 725 aaPredicted RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 KLF6Q99612 283 aaPredicted RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 OLFM1Q99784 485 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 SLC2A11Q9BYW1 496 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 LMAN2LQ9H0V9 348 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 FAM96AQ9H5X1 160 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 TLR9Q9NR96 1032 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 MID2Q9UJV3 735 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 FBXO5Q9UKT4 447 aa7.21□□□□□ -1.26
NPHP1-201ENST00000316534 INTS6Q9UL03 887 aaKnown RBP7.21□□□□□ -1.26
NPHP1-201ENST00000316534 A0A096LPK6 155 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 TRAV19A0A0A6YYK7 116 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.2□□□□□ -1.26
NPHP1-201ENST00000316534 GOLGA8RI6L899 631 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 SLC22A2O15244 555 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 TMCC1O94876 653 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 TOP3BO95985 862 aaKnown RBP7.2□□□□□ -1.26
NPHP1-201ENST00000316534 C8AP07357 584 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 STC1P52823 247 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 IRF9Q00978 393 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 TRAF2Q12933 501 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 POU6F1Q14863 301 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 RNF219Q5W0B1 726 aaPredicted RBP7.2□□□□□ -1.26
NPHP1-201ENST00000316534 ICE2Q659A1 982 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 DENND6AQ8IWF6 608 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 RHEBL1Q8TAI7 183 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 LPGAT1Q92604 370 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 FSD1LQ9BXM9 530 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 EBF2Q9HAK2 575 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 IL1RAPL1Q9NZN1 696 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 HACD3Q9P035 362 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 VPS51Q9UID3 782 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 OAS3Q9Y6K5 1087 aaKnown RBP7.2□□□□□ -1.26
NPHP1-201ENST00000316534 TCF20Q9UGU0 1960 aaKnown RBP7.2□□□□□ -1.26
NPHP1-201ENST00000316534 FAM95CA0A1B0GW59 222 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 HIDE1A8MVS5 230 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 ATP9BO43861 1147 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 WFS1O76024 890 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 HAUS5O94927 633 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 UBOX5O94941 541 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 ARHGEF15O94989 841 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 PGLSO95336 258 aa7.2□□□□□ -1.26
NPHP1-201ENST00000316534 CXCL14O95715 111 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms