RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LRCH3Q96II8 777 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 MRGPRX3Q96LB0 322 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 UGT1A7Q9HAW7 530 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 UGT1A10Q9HAW8 530 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 UGT1A8Q9HAW9 530 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 PLA2G4CQ9UP65 541 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 NUMBLQ9Y6R0 609 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 MROH6A6NGR9 719 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 FOXO6A8MYZ6 492 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 TIMM44O43615 452 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 FZD6O60353 706 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 KRT37O76014 449 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 KRT38O76015 456 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 PGLSO95336 258 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 CRTAMO95727 393 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 PRKCGP05129 697 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 GJA4P35212 333 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 SERPINB9P50453 376 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 CCNHP51946 323 aaPredicted RBP22.67■■□□□ 1.22
IRF3-201ENST00000309877 QPCTQ16769 361 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 KIAA0930Q6ICG6 404 aaPredicted RBP22.67■■□□□ 1.22
IRF3-201ENST00000309877 KDM7AQ6ZMT4 941 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 TRABD2AQ86V40 505 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 TUBGCP5Q96RT8 1024 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 IARS2Q9NSE4 1012 aaKnown RBP22.67■■□□□ 1.22
IRF3-201ENST00000309877 SENP1Q9P0U3 644 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 DOCK8Q8NF50 2099 aa22.67■■□□□ 1.22
IRF3-201ENST00000309877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 HTRA2O43464 458 aaPredicted RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 LDB2O43679 373 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 SLC8A1P32418 973 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 VASPP50552 380 aaPredicted RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 RPL26P61254 145 aaKnown RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 THOC5Q13769 683 aaKnown RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 EIF4HQ15056 248 aaKnown RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 ITPRIPL2Q3MIP1 535 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 TEDDM1Q5T9Z0 273 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 DPY19L3Q6ZPD9 716 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 PLPP6Q8IY26 295 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 CPEB1Q9BZB8 566 aaKnown RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 ZDHHC6Q9H6R6 413 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 BRD9Q9H8M2 597 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 SLC17A6Q9P2U8 582 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 RPL26L1Q9UNX3 145 aaKnown RBP22.66■■□□□ 1.22
IRF3-201ENST00000309877 ACTL7BQ9Y614 415 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 ARL5AQ9Y689 179 aa22.66■■□□□ 1.22
IRF3-201ENST00000309877 TTC34A8MYJ7 566 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 PRRT4C9JH25 899 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 TRAFD1O14545 582 aaPredicted RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 SNRPAP09012 282 aaKnown RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 ATP1A2P50993 1020 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 MESP2Q0VG99 397 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 GRM3Q14832 879 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 PTPRNQ16849 979 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 PREPLQ4J6C6 727 aaPredicted RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 PACS1Q6VY07 963 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 GLT6D1Q7Z4J2 308 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 NXPE3Q969Y0 559 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 CPNE1Q99829 537 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 SELENOSQ9BQE4 189 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 NSMCE4AQ9NXX6 385 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 SPO11Q9Y5K1 396 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 TBC1D3BA6NDS4 549 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 C2orf81A6NN90 581 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 GOLGA8TH3BQL2 631 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 MT-ND3P03897 115 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 KCNA5P22460 613 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 OPRD1P41143 372 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 ABL2P42684 1182 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 GRIA4P48058 902 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 ARCN1P48444 511 aaKnown RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 HTR4Q13639 388 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 SKIV2LQ15477 1246 aaKnown RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 TAF1AQ15573 450 aaPredicted RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 CCDC85BQ15834 202 aaPredicted RBP22.65■■□□□ 1.22
IRF3-201ENST00000309877 TERB1Q8NA31 727 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 OR2A12Q8NGT7 310 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 FRS2Q8WU20 508 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 PIH1D2Q8WWB5 315 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 PEX13Q92968 403 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 AGAP2Q99490 1192 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 TRABDQ9H4I3 376 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 HACD3Q9P035 362 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 ADAM21Q9UKJ8 722 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 KCTD3Q9Y597 815 aa22.65■■□□□ 1.22
IRF3-201ENST00000309877 DENND4AQ7Z401 1863 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 KIF26AQ9ULI4 1882 aaPredicted RBP22.64■■□□□ 1.21
IRF3-201ENST00000309877 GRXCR2A6NFK2 248 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 ANHXE9PGG2 379 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 RRP9O43818 475 aaKnown RBP22.64■■□□□ 1.21
IRF3-201ENST00000309877 CNTFP26441 200 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 GP5P40197 560 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 EIF2DP41214 584 aaKnown RBP22.64■■□□□ 1.21
IRF3-201ENST00000309877 GRTP1Q5TC63 336 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 GABPB2Q8TAK5 448 aaPredicted RBP22.64■■□□□ 1.21
IRF3-201ENST00000309877 STYXQ8WUJ0 223 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 UCMAQ8WVF2 138 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 MTBPQ96DY7 904 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 SMC6Q96SB8 1091 aa22.64■■□□□ 1.21
IRF3-201ENST00000309877 SUV39H2Q9H5I1 410 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms