RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 FGF18O76093 207 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 LUC7L3O95232 432 aaKnown RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 S1PR4O95977 384 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 SERPINB5P36952 375 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 ARSDP51689 593 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 FAM45BPQ6NSW5 357 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 MRNIPQ6NTE8 343 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 CPXM2Q8N436 756 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 FSTL5Q8N475 847 aaPredicted RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 KIF2BQ8N4N8 673 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 FIBCD1Q8N539 461 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 GPATCH11Q8N954 259 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 TTC8Q8TAM2 541 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 FAM45AQ8TCE6 357 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 PDCD6IPQ8WUM4 868 aaKnown RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 AUTS2Q8WXX7 1259 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 MRPS31Q92665 395 aaKnown RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 GATA5Q9BWX5 397 aaPredicted RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 NMUR2Q9GZQ4 415 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 DRC3Q9H069 523 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 MUC3BQ9H195 1237 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 ARL8BQ9NVJ2 186 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 MARCOQ9UEW3 520 aaPredicted RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 LSM7Q9UK45 103 aaKnown RBP19.52■□□□□ 0.72
HOXC4-201ENST00000303406 TRIM33Q9UPN9 1127 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 CAPN14A8MX76 684 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 ZNF195O14628 629 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TBL1XO60907 577 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 WFS1O76024 890 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 WISP3O95389 354 aaPredicted RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 GLP2RO95838 553 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 C1RP00736 705 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 LINC00271P0C7V0 271 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 KITP10721 976 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 HDCP19113 662 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 SAT1P21673 171 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 GLDCP23378 1020 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 ARRB2P32121 409 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 DNAJB13P59910 316 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 ARF5P84085 180 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TUBB3Q13509 450 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 FAM83EQ2M2I3 478 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 LILRA6Q6PI73 481 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 ALYREFQ86V81 257 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TMC8Q8IU68 726 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 SUGP1Q8IWZ8 645 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 OR6P1Q8NGX9 317 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 BLOC1S5Q8TDH9 187 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 SCYL1Q96KG9 808 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 LRRC3Q9BY71 257 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 CDH19Q9H159 772 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 POPDC3Q9HBV1 291 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TRPC7Q9HCX4 862 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 NLE1Q9NVX2 485 aaPredicted RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 OR51B4Q9Y5P0 310 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 CPQQ9Y646 472 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 CXorf51AA0A1B0GTR3 108 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TGM5O43548 720 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 GJB3O75712 270 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 ATP6V1G2O95670 118 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 HSPA4LO95757 839 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 CNPP09543 421 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 AVPR1AP37288 418 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 RGRP47804 291 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 GALNT3Q14435 633 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TAF1AQ15573 450 aaPredicted RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 MPP7Q5T2T1 576 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 RBM20Q5T481 1227 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 HECTD2Q5U5R9 776 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 AGAP9Q5VTM2 703 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 HTR3DQ70Z44 454 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 PTAR1Q7Z6K3 402 aaPredicted RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 DCAF4L2Q8NA75 395 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 CLP1Q92989 425 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 NXNL1Q96CM4 212 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 CCDC126Q96EE4 140 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TMA16Q96EY4 203 aaKnown RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 TBATAQ96M53 351 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 IGSF5Q9NSI5 407 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 SMPD4Q9NXE4 827 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 XPR1Q9UBH6 696 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.51■□□□□ 0.71
HOXC4-201ENST00000303406 VWA7Q9Y334 891 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 RAP2CQ9Y3L5 183 aa19.51■□□□□ 0.71
HOXC4-201ENST00000303406 DENND4CQ5VZ89 1909 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 C2orf71A6NGG8 1288 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 H0Y626 953 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 TK2O00142 265 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 CBX4O00257 560 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 NPHS1O60500 1241 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 CD160O95971 181 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 LRG1P02750 347 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 RBP1P09455 135 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 ACRP10323 421 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 CDC25CP30307 473 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 SCNN1BP51168 640 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 ZNF140P52738 457 aaPredicted RBP19.5■□□□□ 0.71
HOXC4-201ENST00000303406 DLG1Q12959 904 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms