RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PRKCHP24723 683 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ALDH4A1P30038 563 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 GRK4P32298 578 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 CEP19Q96LK0 163 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 WDR83Q9BRX9 315 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 PREBQ9HCU5 417 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 COPG1Q9Y678 874 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 VPS26AO75436 327 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ESRRBO95718 433 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 EFNA1P20827 205 aaPredicted RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 RELL1Q8IUW5 271 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ENDOVQ8N8Q3 282 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 MRPL57Q9BQC6 102 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 CRLS1Q9UJA2 301 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ZNF112Q9UJU3 913 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 FZD10Q9ULW2 581 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 H2AFYO75367 372 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 LRATO95237 230 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 SMPD1P17405 629 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 GK3PQ14409 553 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 TMEM110Q86TL2 294 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 OTULINQ96BN8 352 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 CCDC126Q96EE4 140 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 BCO2Q9BYV7 579 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PLK2Q9NYY3 685 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 NUMBLQ9Y6R0 609 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 C2orf81A6NN90 581 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 E7ESA3 106 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 CXCL11O14625 94 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 CTPS1P17812 591 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 NR1H2P55055 460 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 TARBP2Q15633 366 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 GCNT7Q6ZNI0 430 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 GLT6D1Q7Z4J2 308 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 ZNF410Q86VK4 478 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 OSTM1Q86WC4 334 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PLEKHG4BQ96PX9 1271 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 RIC8BQ9NVN3 520 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 TOR1BO14657 336 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PBX3P40426 434 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PTPN9P43378 593 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PCYT1AP49585 367 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 FAM81AQ8TBF8 368 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 ZC3H15Q8WU90 426 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 CDK15Q96Q40 435 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 KCNA7Q96RP8 456 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 ACTR8Q9H981 624 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 ENTPD7Q9NQZ7 604 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 KLQ9UEF7 1012 aa13.37□□□□□ -0.27
CASC4-201ENST00000299957 PAIP2BQ9ULR5 123 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 RBMX2Q9Y388 322 aaKnown RBP13.37□□□□□ -0.27
CASC4-201ENST00000299957 F5H5T6 163 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 TRMUO75648 421 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 PPP3CCP48454 512 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 HARS2P49590 506 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 CLEC20AQ6ZU45 233 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 ATP13A1Q9HD20 1204 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 TAS2R13Q9NYV9 303 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 MARCH2Q9P0N8 246 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 LRRC14BA6NHZ5 514 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 IQCF5A8MTL0 148 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 AURKAO14965 403 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 SEC22BO75396 215 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 STBD1O95210 358 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 BCL10O95999 233 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 LBPP18428 481 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 CPT1AP50416 773 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 SLC18A1P54219 525 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 HECTD2Q5U5R9 776 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 TIGD7Q6NT04 549 aaPredicted RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 LINGO4Q6UY18 593 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 GIPC3Q8TF64 312 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 FAR2Q96K12 515 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 ZFRQ96KR1 1074 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 KLHL25Q9H0H3 589 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 VTA1Q9NP79 307 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 RSL24D1Q9UHA3 163 aaKnown RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 SMIM31A0A1B0GVY4 71 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 GPR182O15218 404 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 DAB1O75553 588 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms