RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 VWA8A3KMH1 1905 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 A0A0D9SEW6 157 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 TRPA1O75762 1119 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 RPLP2P05387 115 aaKnown RBP15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 THRAP10827 490 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 ZNF235Q14590 738 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 TRIP10Q15642 601 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 PPP1R3AQ16821 1122 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 FBXO48Q5FWF7 155 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 ISLR2Q6UXK2 745 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 DHDDSQ86SQ9 333 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 KDM1BQ8NB78 822 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 DNAJC1Q96KC8 554 aaKnown RBP15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 BTN2A3PQ96KV6 586 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 RTKNQ9BST9 563 aa15.9■□□□□ 0.14
NCKIPSD-201ENST00000294129 RGSL1A5PLK6 1076 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 FKBP6O75344 327 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 COL6A2P12110 1019 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 HDCP19113 662 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 ATP5F1P24539 256 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 HTR7P34969 479 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 ART3Q13508 389 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 CLEC6AQ6EIG7 209 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 PGM2L1Q6PCE3 622 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 GK5Q6ZS86 529 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 KLHDC8BQ8IXV7 354 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 LGI2Q8N0V4 545 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 KYQ8NBH2 561 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 OR13C4Q8NGS5 318 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 PTCD2Q8WV60 388 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 C1orf74Q96LT6 269 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 SMIM14Q96QK8 99 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 ECSITQ9BQ95 431 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 TMEM248Q9NWD8 314 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 COPG1Q9Y678 874 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 A0A087X1B8 175 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 A8MT66 165 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 MAP3K13O43283 966 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 TLR5O60602 858 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 RPL17P18621 184 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 NDST2P52849 883 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 THOP1P52888 689 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 CDH13P55290 713 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 MRPS35P82673 323 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 GRAMD1BQ3KR37 738 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 TMCO4Q5TGY1 634 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 AGAP9Q5VTM2 703 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 METTL21CQ5VZV1 264 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 KLC3Q6P597 504 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 PRSS55Q6UWB4 352 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 TMEM173Q86WV6 379 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 CILP2Q8IUL8 1156 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 ZNF683Q8IZ20 524 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 C8orf48Q96LL4 319 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 TLR8Q9NR97 1041 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 SPATS2LQ9NUQ6 558 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 CLIC5Q9NZA1 410 aa15.89■□□□□ 0.13
NCKIPSD-201ENST00000294129 PATJQ8NI35 1801 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 TXNDC9O14530 226 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 SUPT7LO94864 414 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 EOMESO95936 686 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 SATB1Q01826 763 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 LBRQ14739 615 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 OR7D4Q8NG98 312 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 VWA7Q9Y334 891 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 LTA4HP09960 611 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 MRPS22P82650 360 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 GEN1Q17RS7 908 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 TECRLQ5HYJ1 363 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 RTP2Q5QGT7 225 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 IRGCQ6NXR0 463 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 MSANTD2Q6P1R3 559 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 TMEM207Q6UWW9 146 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 CALML6Q8TD86 181 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 FUBP3Q96I24 572 aaKnown RBP eCLIP15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 EBF3Q9H4W6 596 aa15.88■□□□□ 0.13
NCKIPSD-201ENST00000294129 AOC2O75106 756 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 XRCC1P18887 633 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 KCNC1P48547 511 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 MTTPP55157 894 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 SULT2A1Q06520 285 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 TRIP4Q15650 581 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 MAP3K21Q5TCX8 1036 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 TAS1R1Q7RTX1 841 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 PIWIL4Q7Z3Z4 852 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 ARHGAP18Q8N392 663 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 PCDH20Q8N6Y1 951 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 DBF4BQ8NFT6 615 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 ARRDC2Q8TBH0 407 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 CYP2S1Q96SQ9 504 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 MRM3Q9HC36 420 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 UBA6A0AVT1 1052 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 MTMR11A4FU01 709 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 SMIM24O75264 130 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 IPO13O94829 963 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms