RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 TPP1O14773 563 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 RAB27AP51159 221 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ARMC12Q5T9G4 340 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 EGFLAMQ63HQ2 1017 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 HHIPL2Q6UWX4 724 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 RBM4BQ9BQ04 359 aaKnown RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 RBM4Q9BWF3 364 aaKnown RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 SAMHD1Q9Y3Z3 626 aaKnown RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 MMP14P50281 582 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 OR52K2Q8NGK3 314 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 TP53INP1Q96A56 240 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 TCF12Q99081 682 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 WFS1O76024 890 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 NR4A1P22736 598 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 SERPINA4P29622 427 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 PITPNAQ00169 270 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF268Q14587 947 aaPredicted RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 PDCD4Q53EL6 469 aaKnown RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 TMC7Q7Z402 723 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 KCTD4Q8WVF5 259 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 AVILO75366 819 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 MMP13P45452 471 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 MEA1Q16626 185 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 GJB7Q6PEY0 223 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 QSOX2Q6ZRP7 698 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 RFKQ969G6 155 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ACAT2Q9BWD1 397 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ALG5Q9Y673 324 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 E9PCH4 1651 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 FTH1P02794 183 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ECHS1P30084 290 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 IGFALSP35858 605 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 TKTL1P51854 596 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF844Q08AG5 666 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 TBC1D21Q8IYX1 336 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ELOVL4Q9GZR5 314 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 DNAJA2O60884 412 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 UGT2B17O75795 530 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 MAPK8P45983 427 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 FBXO47Q5MNV8 452 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 LIPMQ5VYY2 423 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 GCNT7Q6ZNI0 430 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 PM20D2Q8IYS1 436 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 PPEF2O14830 753 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 MID1O15344 667 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 FCGRTP55899 365 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 MTFMTQ96DP5 389 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 DIRAS2Q96HU8 199 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 GPER1Q99527 375 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 MAP10Q9P2G4 905 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 GNEQ9Y223 722 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ABCA6Q8N139 1617 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ARPC4-TTLL3A0A0A6YYG9 625 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 BBIP1A8MTZ0 92 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 M0R036 132 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 MT-CO1P00395 513 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 PCSK2P16519 638 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 GALK1P51570 392 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 HMBOX1Q6NT76 420 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF567Q8N184 647 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 CDYL2Q8N8U2 506 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 EZH1Q92800 747 aaPredicted RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 SPACA7Q96KW9 195 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 RIOK2Q9BVS4 552 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 KANTRA0A1W2PQU2 76 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 OR10H3O60404 316 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 CATP04040 527 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 FSHRP23945 695 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ERVK-24P63145 666 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 GALNTL5Q7Z4T8 443 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 LSM14AQ8ND56 463 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ART5Q96L15 291 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 NOL11Q9H8H0 719 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ELP3Q9H9T3 547 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 IFT46Q9NQC8 304 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 CCNDBP1O95273 360 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 LTA4HP09960 611 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 ETS2P15036 469 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 NCK1P16333 377 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 EIF5AL1Q6IS14 154 aaKnown RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 SENP6Q9GZR1 1112 aaPredicted RBP12.15□□□□□ -0.46
SRRM4-201ENST00000267260 NEXMIFQ5QGS0 1516 aa12.15□□□□□ -0.46
SRRM4-201ENST00000267260 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.15□□□□□ -0.47
SRRM4-201ENST00000267260 PRMT5O14744 637 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms