RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 OXCT1P55809 520 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SLC9A4Q6AI14 798 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 IL27RAQ6UWB1 636 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CCDC185Q8N715 623 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 ITFG2Q969R8 447 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 ZHX1-C8orf76Q96EF9 292 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 HGH1Q9BTY7 390 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 DUSP16Q9BY84 665 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SENP6Q9GZR1 1112 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 PRR23D1E9PI22 279 aaPredicted RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CBX4O00257 560 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 MATN2O00339 956 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 IDH3BO43837 385 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ASLP04424 464 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PRR23D2P0DMB1 279 aaPredicted RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SMIM10L2AP0DMW4 78 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SMIM10L2BP0DMW5 78 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 MLNP12872 115 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ITGAXP20702 1163 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 NNMTP40261 264 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SERPINH1P50454 418 aaKnown RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CYP4F2P78329 520 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 TNK2Q07912 1038 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CYP4F3Q08477 520 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 FBXO48Q5FWF7 155 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CRTC3Q6UUV7 619 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 TMEM86AQ8N2M4 240 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 MPP5Q8N3R9 675 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 NIPA2Q8N8Q9 360 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SETD9Q8NE22 299 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 NXNL1Q96CM4 212 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 MCRS1Q96EZ8 462 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SERPINB11Q96P15 392 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 TEX12Q9BXU0 123 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 EHD3Q9NZN3 535 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 INVSQ9Y283 1065 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PRRG1O14668 218 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF135P52742 658 aaPredicted RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PPIL2Q13356 520 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SEMA5AQ13591 1074 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 DPYSQ14117 519 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ARHGEF7Q14155 803 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 METTL21CQ5VZV1 264 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 OGFOD2Q6N063 350 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PAGE2Q7Z2X7 111 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CUZD1Q86UP6 607 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 GLT1D1Q96MS3 346 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 APOL4Q9BPW4 351 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 FZD8Q9H461 694 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ARHGEF4Q9NR80 690 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CDH9Q9ULB4 789 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SMIM28A0A1B0GU29 152 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 H3BNX3 289 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 WBP4O75554 376 aaKnown RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 DLDP09622 509 aaKnown RBP11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PIRTP0C851 137 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 FMO4P31512 558 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 BNIP3Q12983 259 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 VPS26BQ4G0F5 336 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CLEC6AQ6EIG7 209 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 XKR5Q6UX68 686 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ASRGL1Q7L266 308 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF540Q8NDQ6 660 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 OR52B2Q96RD2 323 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 FETUBQ9UGM5 382 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 CRYBG1Q9Y4K1 1723 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 TRAF6Q9Y4K3 522 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SQORQ9Y6N5 450 aa11.61□□□□□ -0.55
VPS33A-201ENST00000267199 SEC22BO75396 215 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 YAP1P46937 504 aaKnown RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CCNG1P51959 295 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 GRM3Q14832 879 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 FAM117BQ6P1L5 589 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TTC30BQ8N4P2 665 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 QKIQ96PU8 341 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 MRPL57Q9BQC6 102 aaKnown RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 FANCEQ9HB96 536 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 DUSP12Q9UNI6 340 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 PDLIM1O00151 329 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TFECO14948 347 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TYROBPO43914 113 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CST1P01037 141 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 SERPIND1P05546 499 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ADSLP30566 484 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 MAXP61244 160 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 HPCAP84074 193 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 GNA12Q03113 381 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF846Q147U1 533 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ARHGEF6Q15052 776 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 IL23RQ5VWK5 629 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 FSTL4Q6MZW2 842 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 GCNT7Q6ZNI0 430 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms