RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SLC25A52Q3SY17 297 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 PYCR3Q53H96 274 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 C9orf57Q5W0N0 161 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 GPR141Q7Z602 305 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 RALGPS2Q86X27 583 aaPredicted RBP13.07□□□□□ -0.32
SNX1-201ENST00000261889 HS3ST5Q8IZT8 346 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 ARRDC4Q8NCT1 418 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
SNX1-201ENST00000261889 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 FAM167AQ96KS9 214 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 MCF2P10911 925 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 ZFXP17010 805 aaPredicted RBP13.07□□□□□ -0.32
SNX1-201ENST00000261889 DIO3P55073 304 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 PPIL2Q13356 520 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 PIWIL3Q7Z3Z3 882 aaKnown RBP13.07□□□□□ -0.32
SNX1-201ENST00000261889 LPPQ93052 612 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 OSBPL11Q9BXB4 747 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 PRPF19Q9UMS4 504 aaKnown RBP13.07□□□□□ -0.32
SNX1-201ENST00000261889 ZNF510Q9Y2H8 683 aa13.07□□□□□ -0.32
SNX1-201ENST00000261889 C1orf232A0A0U1RR37 186 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 ERI2A8K979 691 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 C19orf81C9J6K1 198 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 H3BNH8 94 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 HBP1O60381 514 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 ALDOCP09972 364 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 CYP2B6P20813 491 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 HOXA11P31270 313 aaPredicted RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 ADRA1BP35368 520 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 IREB2P48200 963 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 ENPEPQ07075 957 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 DHFR2Q86XF0 187 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 ZC3H7AQ8IWR0 971 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 HDAC11Q96DB2 347 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 HHIPL1Q96JK4 782 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 ASB7Q9H672 318 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 NME4O00746 187 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 MYL4P12829 197 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 ABCD1P33897 745 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 POLR2IP36954 125 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 LAPTM5Q13571 262 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 C16orf87Q6PH81 154 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 B3GALNT2Q8NCR0 500 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 APPL2Q8NEU8 664 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 C11orf84Q9BUA3 381 aaPredicted RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 DGCR6LQ9BY27 220 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 UTP6Q9NYH9 597 aaKnown RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 ANK1P16157 1881 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 A8MT66 165 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 AXIN1O15169 862 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 PTPN9P43378 593 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 RAB10P61026 200 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 TNK2Q07912 1038 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 DNAJC14Q6Y2X3 702 aaPredicted RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
SNX1-201ENST00000261889 ERO1BQ86YB8 467 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 TEX37Q96LM6 180 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 CXorf21Q9HAI6 301 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
SNX1-201ENST00000261889 DCLK1O15075 740 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 TIMM44O43615 452 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ZNF189O75820 626 aaPredicted RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 PENKP01210 267 aaPredicted RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 MAGP20916 626 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 UGT1A1P22309 533 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 UGT1A4P22310 534 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ATICP31939 592 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 UGT1A3P35503 534 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 UGT1A5P35504 534 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 PTPRRQ15256 657 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 CYP51A1Q16850 503 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 IMPG1Q17R60 797 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 INSCQ1MX18 579 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 BTBD8Q5XKL5 378 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 TBPL2Q6SJ96 375 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 SHCBP1Q8NEM2 672 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ASB9Q96DX5 294 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 RANBP9Q96S59 729 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 SLC2A11Q9BYW1 496 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 SPAG4Q9NPE6 437 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ACTL7AQ9Y615 435 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 F8W810 466 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 H3BRB1 525 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 K7EPI3 171 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 CXCL11O14625 94 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 NRP2O60462 931 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 XYLBO75191 536 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms