RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SLC10A2Q12908 348 aaPredicted RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 FOXC1Q12948 553 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 XRCC4Q13426 336 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 TEAD4Q15561 434 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 UAP1L1Q3KQV9 507 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 SETMARQ53H47 684 aaPredicted RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 SLC45A4Q5BKX6 768 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 PIP5KL1Q5T9C9 394 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 PEAR1Q5VY43 1037 aaPredicted RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 KIAA1161Q6NSJ0 714 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 TRIM69Q86WT6 500 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 SLC41A1Q8IVJ1 513 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 ARRDC3Q96B67 414 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 OLFM3Q96PB7 478 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 VAT1Q99536 393 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 HEMGNQ9BXL5 484 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 MIR1-1HGQ9H1L0 117 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 C6orf106Q9H6K1 298 aaPredicted RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 NT5MQ9NPB1 228 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 SERGEFQ9UGK8 458 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 DMTF1Q9Y222 760 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 TTLL3Q9Y4R7 772 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 CAPN6Q9Y6Q1 641 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 FREM2Q5SZK8 3169 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 ZFYVE26Q68DK2 2539 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 A0A0U1RQJ8 604 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 A0A1W2PPC4 97 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 BCAT2O15382 392 aaPredicted RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 KIF5CO60282 957 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 MAP3K6O95382 1288 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 JCHAINP01591 159 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 SERPINF2P08697 491 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 GKP32189 559 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 TNNT3P45378 269 aaPredicted RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 AFF3P51826 1226 aaKnown RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 ATXN3P54252 364 aaPredicted RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 SGCGQ13326 291 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 PARS2Q7L3T8 475 aaKnown RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 HORMAD1Q86X24 394 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 CDKL3Q8IVW4 592 aaPredicted RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 BIRC7Q96CA5 298 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 LGMNQ99538 433 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 C1QTNF7Q9BXJ2 289 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 FRMD8P1Q9BZ68 369 aaPredicted RBP11.38□□□□□ -0.59
SF3B6-201ENST00000233468 ZDHHC5Q9C0B5 715 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 TMEM9BQ9NQ34 198 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 SEPT10Q9P0V9 454 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 SLC6A14Q9UN76 642 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 FADS3Q9Y5Q0 445 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 FAM208BQ5VWN6 2430 aa11.38□□□□□ -0.59
SF3B6-201ENST00000233468 MUC22E2RYF6 1773 aaPredicted RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 TSPAN11A1L157 253 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 UPK3BL1B0FP48 263 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 UPK3BL2E5RIL1 263 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 H7C0C1 242 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PLK4O00444 970 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 GPR37O15354 613 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 DDX3YO15523 660 aaKnown RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 MAGEC1O60732 1142 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PIGNO95427 931 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 CFIP05156 583 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PROS1P07225 676 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PYGMP11217 842 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 CR2P20023 1033 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 ATP5OP48047 213 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 METAP1P53582 386 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 RACK1P63244 317 aaKnown RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PRKD1Q15139 912 aaPredicted RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 UGP2Q16851 508 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 TEX44Q53QW1 395 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 TRIM61Q5EBN2 209 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 SWT1Q5T5J6 900 aaKnown RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 ARMC12Q5T9G4 340 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 MEI1Q5TIA1 1274 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 ALG1LQ6GMV1 187 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 IL27RAQ6UWB1 636 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 NPNTQ6UXI9 565 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 UNQ6494/PRO21346Q6UXR6 183 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 CAMK1DQ8IU85 385 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 DEFB124Q8NES8 71 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 CXorf40AQ8TE69 158 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 MAIP1Q8WWC4 291 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 ALG3Q92685 438 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PPP1R2P1Q96PQ5 205 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 SEMA3CQ99985 751 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 CARD9Q9H257 536 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 NOD2Q9HC29 1040 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 EIF2B4Q9UI10 523 aaKnown RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 TRHDEQ9UKU6 1024 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 DNPEPQ9ULA0 475 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 ZMIZ1Q9ULJ6 1067 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PHTF1Q9UMS5 762 aa11.37□□□□□ -0.59
SF3B6-201ENST00000233468 PACSIN2Q9UNF0 486 aaPredicted RBP11.37□□□□□ -0.59
SF3B6-201ENST00000233468 JRKLQ9Y4A0 524 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms