RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 HSP90B2PQ58FF3 399 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 NLRP9Q7RTR0 991 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 BLOC1S5Q8TDH9 187 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 DNASE1L2Q92874 299 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 HEPHQ9BQS7 1158 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 TMEM245Q9H330 911 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 SUV39H2Q9H5I1 410 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 ZDHHC6Q9H6R6 413 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 VPS18Q9P253 973 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 THAP10Q9P2Z0 257 aaPredicted RBP16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 STARD13Q9Y3M8 1113 aa16.05■□□□□ 0.16
SNRPD3-201ENST00000215829 PRUNE2Q8WUY3 3088 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 POC1B-GALNT4F8VUJ3 575 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 SPECC1L-ADORA2AF8WAN1 911 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 PAPSS2O95340 614 aaPredicted RBP16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 GCAP28676 217 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 SLC8A1P32418 973 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 CTHP32929 405 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 TNFRSF4P43489 277 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 SLCO1A2P46721 670 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 GRIA4P48058 902 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 EPHB1P54762 984 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 ZNF449Q6P9G9 518 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 ECHDC3Q96DC8 303 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 MTG2Q9H4K7 406 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 C8orf33Q9H7E9 229 aaPredicted RBP16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 TREX1Q9NSU2 369 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 SLC24A2Q9UI40 661 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 HCN2Q9UL51 889 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
SNRPD3-201ENST00000215829 FAM159BA6NKW6 160 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 SMIM23A6NLE4 172 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 LDB2O43679 373 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PIAS1O75925 651 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PRKCGP05129 697 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 ASGR2P07307 311 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PIRTP0C851 137 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 EFTUD2Q15029 972 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 HNRNPA1L2Q32P51 320 aaKnown RBP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 TSTD2Q5T7W7 516 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 ESRP1Q6NXG1 681 aaKnown RBP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 GDPD4Q6W3E5 623 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 RALGPS2Q86X27 583 aaPredicted RBP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 TDRPQ86YL5 185 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 UNC5BQ8IZJ1 945 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 ZNF366Q8N895 744 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CERS2Q96G23 380 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 LRIG1Q96JA1 1093 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 DHRS4Q9BTZ2 278 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CENPHQ9H3R5 247 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 SPO11Q9Y5K1 396 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 MUC22E2RYF6 1773 aaPredicted RBP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 COL4A2P08572 1712 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 MYO10Q9HD67 2058 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 EDDM13A0A1B0GTR0 161 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 A0A1W2PQ67 120 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CCDC78A2IDD5 438 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CXorf49A8MYA2 514 aaPredicted RBP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 GOLGA8KD6RF30 607 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 H3BQF6 201 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CDH16O75309 829 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CRTAMO95727 393 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 UGT2B4P06133 528 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 MGAT5Q09328 741 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 RASA2Q15283 850 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 E2F5Q15329 346 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 CNGA3Q16281 694 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 C9orf64Q5T6V5 341 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 TXNDC11Q6PKC3 985 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 SERPINA13PQ6UXR4 307 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 LRRC6Q86X45 466 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 SPOCK2Q92563 424 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PEX13Q92968 403 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PGM2Q96G03 612 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PAFAH2Q99487 392 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 MAGEE1Q9HCI5 957 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PPANQ9NQ55 473 aaKnown RBP16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 SMYD2Q9NRG4 433 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 HEBP1Q9NRV9 189 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 HACD3Q9P035 362 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 SLC2A6Q9UGQ3 507 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 IL36AQ9UHA7 158 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 WASF2Q9Y6W5 498 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 PIAS3Q9Y6X2 628 aa16.03■□□□□ 0.16
SNRPD3-201ENST00000215829 K7EQS6 105 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 RGS16O15492 202 aaPredicted RBP16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 LEFTY1O75610 366 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 ERVK-10P10266 1014 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 HLA-EP13747 358 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 IL9P15248 144 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 PAMP19021 973 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 ABL2P42684 1182 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 IL12RB1P42701 662 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 MSH2P43246 934 aa16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 TAF1AQ15573 450 aaPredicted RBP16.02■□□□□ 0.15
SNRPD3-201ENST00000215829 ARSIQ5FYB1 569 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms